6xeq: Difference between revisions

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<StructureSection load='6xeq' size='340' side='right'caption='[[6xeq]], [[Resolution|resolution]] 3.20&Aring;' scene=''>
<StructureSection load='6xeq' size='340' side='right'caption='[[6xeq]], [[Resolution|resolution]] 3.20&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[6xeq]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/"acetobacter_capsulatum"_(sic)_shimwell_1936 "acetobacter capsulatum" (sic) shimwell 1936]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6XEQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6XEQ FirstGlance]. <br>
<table><tr><td colspan='2'>[[6xeq]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Gluconobacter_oxydans Gluconobacter oxydans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6XEQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6XEQ FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.2&#8491;</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">GOX1705 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=442 "Acetobacter capsulatum" (sic) Shimwell 1936])</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Phosphogluconate_dehydrogenase_(NAD(+)-dependent,_decarboxylating) Phosphogluconate dehydrogenase (NAD(+)-dependent, decarboxylating)], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.343 1.1.1.343] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6xeq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6xeq OCA], [https://pdbe.org/6xeq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6xeq RCSB], [https://www.ebi.ac.uk/pdbsum/6xeq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6xeq ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6xeq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6xeq OCA], [https://pdbe.org/6xeq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6xeq RCSB], [https://www.ebi.ac.uk/pdbsum/6xeq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6xeq ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[https://www.uniprot.org/uniprot/6PGDH_GLUOX 6PGDH_GLUOX]] Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NAD to NADH.<ref>PMID:20676631</ref>
[https://www.uniprot.org/uniprot/6PGDH_GLUOX 6PGDH_GLUOX] Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NAD to NADH.<ref>PMID:20676631</ref>  


==See Also==
==See Also==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Gluconobacter oxydans]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Cabrera, R]]
[[Category: Cabrera R]]
[[Category: Castro-Fernandez, V]]
[[Category: Castro-Fernandez V]]
[[Category: Garratt, R C]]
[[Category: Garratt RC]]
[[Category: Herrera-Morande, A]]
[[Category: Herrera-Morande A]]
[[Category: Maturana, P]]
[[Category: Maturana P]]
[[Category: Roversi, P]]
[[Category: Roversi P]]
[[Category: Dehydrogenase]]
[[Category: Oxidoreductase]]
[[Category: Pentose phosphate pathway]]
[[Category: Tetramer]]

Latest revision as of 17:51, 18 October 2023

Crystal structure of the tetrameric 6-phosphogluconate dehydrogenase from Gluconobacter oxidansCrystal structure of the tetrameric 6-phosphogluconate dehydrogenase from Gluconobacter oxidans

Structural highlights

6xeq is a 4 chain structure with sequence from Gluconobacter oxydans. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 3.2Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

6PGDH_GLUOX Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NAD to NADH.[1]

See Also

References

  1. ↑ Rauch B, Pahlke J, Schweiger P, Deppenmeier U. Characterization of enzymes involved in the central metabolism of Gluconobacter oxydans. Appl Microbiol Biotechnol. 2010 Oct;88(3):711-8. doi: 10.1007/s00253-010-2779-9. , Epub 2010 Jul 30. PMID:20676631 doi:http://dx.doi.org/10.1007/s00253-010-2779-9

6xeq, resolution 3.20Å

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