2jxa: Difference between revisions

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==Mouse Latrophilin-1 GPCR Gal_lectin domain in complex with Rhamnose==
==Mouse Latrophilin-1 GPCR Gal_lectin domain in complex with Rhamnose==
<StructureSection load='2jxa' size='340' side='right'caption='[[2jxa]], [[NMR_Ensembles_of_Models | 25 NMR models]]' scene=''>
<StructureSection load='2jxa' size='340' side='right'caption='[[2jxa]]' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[2jxa]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Lk3_transgenic_mice Lk3 transgenic mice]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JXA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2JXA FirstGlance]. <br>
<table><tr><td colspan='2'>[[2jxa]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JXA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2JXA FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=RAM:ALPHA-L-RHAMNOSE'>RAM</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR, 25 models</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2jx9|2jx9]]</div></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=RAM:ALPHA-L-RHAMNOSE'>RAM</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Lphn1 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 LK3 transgenic mice])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2jxa FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2jxa OCA], [https://pdbe.org/2jxa PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2jxa RCSB], [https://www.ebi.ac.uk/pdbsum/2jxa PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2jxa ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2jxa FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2jxa OCA], [https://pdbe.org/2jxa PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2jxa RCSB], [https://www.ebi.ac.uk/pdbsum/2jxa PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2jxa ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/AGRL1_MOUSE AGRL1_MOUSE] Calcium-independent receptor of high affinity for alpha-latrotoxin, an excitatory neurotoxin present in black widow spider venom which triggers massive exocytosis from neurons and neuroendocrine cells. Receptor for TENM2 that mediates heterophilic synaptic cell-cell contact and postsynaptic specialization. Receptor probably implicated in the regulation of exocytosis (By similarity).
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jx/2jxa_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jx/2jxa_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
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</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Lk3 transgenic mice]]
[[Category: Mus musculus]]
[[Category: Campbell, I D]]
[[Category: Campbell ID]]
[[Category: Vakonakis, I]]
[[Category: Vakonakis I]]
[[Category: Beta-sandwich]]
[[Category: Cell adhesion]]
[[Category: Complex]]
[[Category: Disulphide]]
[[Category: G-protein coupled receptor]]
[[Category: Glycosylated]]
[[Category: L-rhamnose]]
[[Category: Lectin]]
[[Category: Membrane]]
[[Category: Receptor]]
[[Category: Signaling protein]]
[[Category: Transducer]]
[[Category: Transmembrane]]

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