5y07: Difference between revisions

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<StructureSection load='5y07' size='340' side='right'caption='[[5y07]], [[Resolution|resolution]] 2.07&Aring;' scene=''>
<StructureSection load='5y07' size='340' side='right'caption='[[5y07]], [[Resolution|resolution]] 2.07&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[5y07]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Yerps Yerps]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5Y07 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5Y07 FirstGlance]. <br>
<table><tr><td colspan='2'>[[5y07]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Yersinia_pseudotuberculosis_IP_32953 Yersinia pseudotuberculosis IP 32953]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5Y07 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5Y07 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PRP:ALPHA-PHOSPHORIBOSYLPYROPHOSPHORIC+ACID'>PRP</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.07&#8491;</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">apt, YPTB0991 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=273123 YERPS])</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PRP:ALPHA-PHOSPHORIBOSYLPYROPHOSPHORIC+ACID'>PRP</scene></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Adenine_phosphoribosyltransferase Adenine phosphoribosyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.2.7 2.4.2.7] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5y07 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5y07 OCA], [https://pdbe.org/5y07 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5y07 RCSB], [https://www.ebi.ac.uk/pdbsum/5y07 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5y07 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5y07 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5y07 OCA], [http://pdbe.org/5y07 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5y07 RCSB], [http://www.ebi.ac.uk/pdbsum/5y07 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5y07 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/APT_YERPS APT_YERPS]] Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis (By similarity).  
[https://www.uniprot.org/uniprot/APT_YERPS APT_YERPS] Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis (By similarity).


==See Also==
==See Also==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Adenine phosphoribosyltransferase]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Yerps]]
[[Category: Yersinia pseudotuberculosis IP 32953]]
[[Category: Pavithra, G C]]
[[Category: Pavithra GC]]
[[Category: Ramagopal, U A]]
[[Category: Ramagopal UA]]
[[Category: Transferase]]

Latest revision as of 11:18, 22 November 2023

Crystal structure of adenine phosphoribosyltransferase from Yersinia pseudotuberculosis with PRPP.Crystal structure of adenine phosphoribosyltransferase from Yersinia pseudotuberculosis with PRPP.

Structural highlights

5y07 is a 2 chain structure with sequence from Yersinia pseudotuberculosis IP 32953. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.07Å
Ligands:, ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

APT_YERPS Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis (By similarity).

See Also

5y07, resolution 2.07Å

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OCA