Lysine-specific histone demethylase 3D structures: Difference between revisions

Michal Harel (talk | contribs)
No edit summary
Michal Harel (talk | contribs)
No edit summary
Line 35: Line 35:
**[[5l3f]], [[5l3g]] - hLSD1 + CoREST + polmyxin peptide<br />
**[[5l3f]], [[5l3g]] - hLSD1 + CoREST + polmyxin peptide<br />
**[[4xbf]] - hLSD1 + CoREST + RNA<br />
**[[4xbf]] - hLSD1 + CoREST + RNA<br />
**[[4uxn]], [[5yjb]], [[6k3e]], [[6kgl]], [[6kgm]], [[6kgn]], [[6te1]] - hLSD1 + CoREST + pyrrolydine inhibitor<br />
**[[4uxn]], [[5yjb]], [[6k3e]], [[6kgl]], [[6kgm]], [[6kgn]], [[6te1]], [[6tuy]], [[6w4k]], [[7e0g]] - hLSD1 + CoREST + pyrrolydine inhibitor<br />
**[[6s35]] - hLSD1 + CoREST + peptide inhibitor<br />
**[[6s35]], [[7cdc]], [[7cdd]], [[7cde]], [[7cdf]], [[7cdg]] - hLSD1 + CoREST + peptide inhibitor<br />
**[[6vyp]] - hLSD1 + CoREST + histones + DNA<br />
**[[6vyp]] - hLSD1 + CoREST + histones + DNA<br />


Line 46: Line 46:
**[[4guu]] – hLSD2 + NPAC + tranylcypromine <br />
**[[4guu]] – hLSD2 + NPAC + tranylcypromine <br />
**[[4gu0]] – hLSD2 + histone 3.3 peptide <br />
**[[4gu0]] – hLSD2 + histone 3.3 peptide <br />
**[[6r25]], [[6r1u]] – hLSD2 + NPAC + histones 3,4,2A,2B + DNA – Cryo EM <br />
**[[6r25]], [[6r1t]], [[6r1u]] – hLSD2 + NPAC + histones 3,4,2A,2B + DNA – Cryo EM <br />


*lysine-specific histone demethylase 5A or JARID1A or KDM5A.  Domains: Jmj 1-87 + 348-588
*lysine-specific histone demethylase 5A or JARID1A or KDM5A.  Domains: Jmj 1-87 + 348-588, ARID 85-175; PHD1 287-344; PHD 1609-1659


**[[6dq4]], [[6dq5]], [[6dq6]], [[6dq7]], [[6dq8]], [[6dq9]], [[6dqa]], [[6dqb]], [[6dqc]], [[6dqd]], [[6dqe]], [[6dqf]] – hLSD5A jmj domain + inhibitor<br />
**[[5e6h]] – hLSD5A jmj domain <br />
**[[5isl]], [[5ivb]], [[5ivc]], [[5ive]], [[5ivf]], [[5ivj]], [[5ivv]], [[5ivy]], [[5iw0]], [[5iwf]], [[5k4l]], [[5v9p]], [[5v9t]], [[6bgu]], [[6bgv]], [[6bgw]], [[6bgx]], [[6bgy]], [[6bgz]], [[6bh0]], [[6bh1]], [[6bh2]], [[6bh3]], [[6bh4]], [[6bh5]],[[6dq4]], [[6dq5]], [[6dq6]], [[6dq7]], [[6dq8]], [[6dq9]], [[6dqa]], [[6dqb]], [[6dqc]], [[6dqd]], [[6dqe]], [[6dqf]] – hLSD5A jmj domain + inhibitor<br />
**[[2kgg]], [[7klo]] – hLSD5A PHD domain - NMR<br />
**[[7klo]] – hLSD5A PHD1 domain - NMR<br />
**[[7klr]] – hLSD5A PHD1 domain + H3 peptide<br />
**[[3gl6]] – hLSD5A PHD domain + H3 peptide<br />
**[[5c11]] – hLSD5A PHD domain + H3 peptide <br />
**[[2kgi]] – hLSD5A PHD domain + H3 peptide - NMR<br />
**[[2jxj]] – hLSD5A ARID domain - NMR<br />


*lysine-specific histone demethylase 5B or JARID1B or KDM5B.  Domains: zinc finger 1 306-360; PHD-type zinc finger 1487-1544; ARID 94-208; JmjC 26-101 + 374-772
*lysine-specific histone demethylase 5B or JARID1B or KDM5B.  Domains: zinc finger 1 306-360; PHD-type zinc finger 1487-1544; ARID 94-208; JmjC 26-101 + 374-772

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

Michal Harel