6yxr: Difference between revisions

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-'''Unreleased structure'''
-The entry 6yxr is ON HOLD
+==Dunaliella Minimal Photosystem I==
+<StructureSection load='6yxr' size='340' side='right'caption='[[6yxr]], [[Resolution|resolution]] 3.40&Aring;' scene=''>
+== Structural highlights ==
+<table><tr><td colspan='2'>[[6yxr]] is a 10 chain structure with sequence from [https://en.wikipedia.org/wiki/Dunaliella_salina Dunaliella salina]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6YXR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6YXR FirstGlance]. <br>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 3.4&#8491;</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=3PH:1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE'>3PH</scene>, <scene name='pdbligand=BCR:BETA-CAROTENE'>BCR</scene>, <scene name='pdbligand=CLA:CHLOROPHYLL+A'>CLA</scene>, <scene name='pdbligand=DGD:DIGALACTOSYL+DIACYL+GLYCEROL+(DGDG)'>DGD</scene>, <scene name='pdbligand=LHG:1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE'>LHG</scene>, <scene name='pdbligand=LMG:1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE'>LMG</scene>, <scene name='pdbligand=LUT:(3R,3R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3-DIOL'>LUT</scene>, <scene name='pdbligand=PQN:PHYLLOQUINONE'>PQN</scene>, <scene name='pdbligand=XAT:(3S,5R,6S,3S,5R,6S)-5,6,5,6-DIEPOXY-5,6,5,6-+TETRAHYDRO-BETA,BETA-CAROTENE-3,3-DIOL'>XAT</scene></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6yxr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6yxr OCA], [https://pdbe.org/6yxr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6yxr RCSB], [https://www.ebi.ac.uk/pdbsum/6yxr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6yxr ProSAT]</span></td></tr>
+</table>
+<div style="background-color:#fffaf0;">
+== Publication Abstract from PubMed ==
+Oxygenic photosynthesis evolved more than 3 billion years ago in cyanobacteria. The increased complexity of photosystem I (PSI) became apparent from the high-resolution structures that were obtained for the complexes that were isolated from various organisms, ranging from cyanobacteria to plants. These complexes are all evolutionarily linked. In this paper, the researchers have uncovered the increased complexity of PSI in a single organism demonstrated by the coexistance of two distinct PSI compositions. The Large Dunaliella PSI contains eight additional subunits, six in PSI core and two light harvesting complexes. Two additional chlorophyll a molecules pertinent for efficient excitation energy transfer in state II transition were identified in PsaL and PsaO. Short distances between these newly identified chlorophylls correspond with fast excitation transfer rates previously reported during state II transition. The apparent PSI conformations could be a coping mechanism for the high salinity.
-Authors: Nelson, N., Caspy, I., Malavath, T., Klaiman, D., Shkolinsky, Y.
+Structure and energy transfer pathways of the Dunaliella Salina photosystem I supercomplex.,Caspy I, Malavath T, Klaiman D, Fadeeva M, Shkolnisky Y, Nelson N Biochim Biophys Acta Bioenerg. 2020 Jun 19:148253. doi:, 10.1016/j.bbabio.2020.148253. PMID:32569661<ref>PMID:32569661</ref>
-Description: Dunaliella Minimal Photosystem I
+From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-[[Category: Unreleased Structures]]
+</div>
-[[Category: Malavath, T]]
+<div class="pdbe-citations 6yxr" style="background-color:#fffaf0;"></div>
-[[Category: Klaiman, D]]
-[[Category: Nelson, N]]
+==See Also==
-[[Category: Caspy, I]]
+*[[Photosystem I 3D structures|Photosystem I 3D structures]]
-[[Category: Shkolinsky, Y]]
+== References ==
+<references/>
+__TOC__
+</StructureSection>
+[[Category: Dunaliella salina]]
+[[Category: Large Structures]]
+[[Category: Caspy I]]
+[[Category: Klaiman D]]
+[[Category: Malavath T]]
+[[Category: Nelson N]]
+[[Category: Shkolinsky Y]]