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Vacuolar protein sorting-associated protein: Difference between revisions

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</StructureSection>
</StructureSection>


==3D structures of vacuolar protein sorting-associated protein==
Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}}
{{#tree:id=OrganizedByTopic|openlevels=0|
*Vps4 domains: MIT 1-82; AAA ATPase 124-437
**[[5xmi]] – yVps4 + ATP – yeast - Cryo EM<br />
**[[2rko]] – yVps4 AAA ATPase domain<br />
**[[3eie]] – yVps4 AAA ATPase domain (mutant)<br />
**[[3eih]] – yVps4 AAA ATPase domain (mutant) + ATPγS<br />
**[[2qp9]] – yVps4 83-437<br />
**[[2qpa]] – yVps4 (mutant) 83-437 + ADP<br />
**[[2v6x]] – yVps4 MIT domain + yVps2 C-terminal<br />
**[[4niq]], [[5fvk]] – yVps4 MIT domain + yVfa1 MIM2 domain<br />
**[[5fvl]] – yVps4 MIT domain + yVPS20 <br />
**[[3mhv]] – yVps4 + yVps Vta1 <br />
**[[6ap1]] – yVps4 + yVps Vta1 + peptide<br />
**[[6oo2]], [[6ndy]] – yVps4 + yVps Vta1 + peptide - Cryo EM<br />
**[[5uie]] – yVps4 + yVps2 + yVps Vta1 – Cryo EM<br />
**[[5xmk]] – yVps4 (mutant) + yVps Vta1 + ATP – Cryo EM<br />
**[[6bmf]] – yVps4 AAA ATPase domain + yVps2P – Cryo EM<br />
*Vps4A
**[[1yxr]] – hVps4A MIT domain – human - NMR<br />
**[[2jq9]] – hVps4A MIT domain + CHMP1A peptide - NMR<br />
**[[2k3w]] – yVps4A MIT domain + CHMP6 peptide - NMR<br />
*Vps4B or Skd1
**[[2jqh]], [[2cpt]], [[1wr0]] – hVps4B MIT domain - NMR<br />
**[[1xwi]] – hVps4B C-terminal<br />
**[[4u7y]] – hVps4B MIT domain + IST1 peptide<br />
**[[2jqk]] – hVps4B MIT domain + CHMP2B<br />
**[[2zam]] – mVps4B - mouse<br />
**[[2zao]] – mVps4B + ADP<br />
**[[2zan]] – mVps4B + ATP<br />
*Vps9
**[[1mn3]] – yVps9 CUE domain 398-451<br />
**[[1p3q]] – yVps9 CUE domain + ubiquitin<br />
*Vps9A
**[[4g01]] – Vps9A + RABF2B – ''Arabidopsis thaliana''<br />
*Vps13
**[[6cbc]] – CtVps13 N-terminal (mutant) – ''Chaetomium thermophilum'' <br />
*Vps15 or serine/threonine protein kinase Vps15
**[[3gre]] – yVps15 WD repeat domain <br />
*Vps23
**[[2f6m]] – yVps23 C-terminal (mutant) + yVps28 N-terminal<br />
**[[3r42]] – yVps23 N-terminal (mutant) + yVps27 peptide <br />
**[[2caz]] – yVps23 + yVps28 N-terminal + SRN2 <br />
**[[2f66]] – yVps23 C-terminal + yVps28 N-terminal + SRN2<br />
**[[2p22]] – yVps23 + yVps28 N-terminal + SRN2 + peptide  <br />
**[[1uzx]] – yVps23 UEV domain 1-161 + ubiquitin <br />
*Vps25
**[[3htu]] – hVps23 C-terminal WH2 domain + hVps20 first helix <br />
*Vps 26A
**[[6md5]] – Vps26A – zebrafish<br />
**[[4p2a]] – mVps26A + sorting nexin-3 <br />
*Vps26B
**[[3lh8]], [[2r51]] – mVps26B <br />
**[[3lh9]], [[3lha]] – mVps26B (mutant)<br />
*Vps26-like
**[[6h7w]] – CtVps26L + Vsp29 + Vsp35 - Cryo EM<br />
*Vps27
**[[2pjw]] – yVps27 C-terminal + protein<br />
**[[6njg]] – yVps27 + polyubiquitin<br />
*Vps28
**[[2g3q]], [[2j9v]] – yVps28 C-terminal <br />
**[[2j9u]] – yVps28 + yVps36 <br />
*Vps29
**[[5wyh]] – hVps29 + interaptin<br />
**[[5osh]], [[5osi]] – hVps29 + hVps35 + interaptin<br />
**[[5gtu]] – hVps29 + TBC1D5<br />
**[[3psn]], [[3pso]] – mVps29 <br />
**[[6vab]] – mVps29 + mVps35 - Cryo EM <br />
**[[2r17]] – yVps29 + yVps35 <br />
**[[5xce]], [[5xch]] – EhVps29 – ''Entamoeba histolytica'' <br />
**[[5xcj]], [[5xck]] – EhVps29 (mutant)<br />
**[[5w8m]] – CtVps29  <br />
**[[6h7w]] – CtVps29 + CtVps35 + CtVps26-like + CtVPS - Cryo EM<br />
*Vps30
**[[3vp7]] – hVps30 C-terminal <br />
*Vps33
**[[5bv1]] – CtVps33 + CtVps16 <br />
**[[5bv0]] – CtVps33 + CtVps16 <br />
*Vps33A
**[[4bx8]] – hVps33A <br />
**[[4bx9]] – hVps33A + hVps16 C-terminal + SNARE domain<br />
*Vps34
**[[5dfz]] – yVps34 + yVps38 + yVps15 + yVps30 + nanobody<br />
*Vps35
**[[5f0k]] – hVps35 N-terminal <br />
**[[5f0j]] – hVps35 + hVps26A + sorting nexin-3 <br />
**[[5f0l]], [[5f0m]], [[5f0p]] – hVps35 + hVps26A + sorting nexin-3 + DMT-1<br />
**[[6vac]] – mVps35 + mVps26A + mVps29 - Cryo EM<br />
*Vps36
**[[5kc2]] – yVps36 + yVps15 <br />
**[[2hth]] – hVps36 GLUE domain 1-138 + ubiquitin <br />
**[[2zme]], [[3cuq]] – hVps36 + hVps25 + SNF8 <br />
*Vps46
**[[3ggz]] – yVps46 MIM motif 176-204 + IST1 <br />
*Vps53
**[[3ns4]] – yVps53 C-terminal <br />
*Vps54
**[[3n1b]] – yVps54 C-terminal <br />
**[[3n1e]] – mVps54 C-terminal <br />
*Vps60
**[[2luh]] – yVps60 + yVps Vta1 - NMR <br />
*Vps72
**[[6gej]], [[6gen]] – yVps72 in nucleosome – Cryo EM<br />
*Vps72 homolog
**[[5chl]] – Vps72 + histone H2A.Z – ''Drosophila melanogaster'' <br />
**[[5fug]] – hVps72 N-terminal + histone H2A.Z <br />
*Vps74
**[[2zih]], [[2zii]] – yVps74<br />
**[[4tu3]] – yVps74 + SAC1<br />
*Vps75
**[[3c9b]], [[3c9d]], [[5agc]] – yVps75 <br />
**[[3dm7]] – yVps75 (mutant)<br />
**[[2zd7]] – yVps75 + peptide  <br />
**[[3q68]], [[3q66]] – yVps75 + histone acetyltransferase  <br />
**[[3q33]] – yVps75 + histone acetyltransferase + histone H3 peptide <br />
**[[6o22]] – yVps75 + histone acetyltransferase + histone H3 peptide + histone H4 peptide + ASF1 - NMR<br />
**[[3q35]] – yVps75 + histone acetyltransferase + acetyl CoA<br />
**[[5yps]] – Vps75 (mutant) – ''Pneumocystis carinii''<br />
*Vps Vta1 or Lip5
**[[2lxl]] – hVps Vta1 <br />
**[[4txp]] – hVps Vta1 N-terminal <br />
**[[2rkk]] – yVps Vta1 N-terminal <br />
**[[2rkl]] – yVps Vta1 C-terminal <br />
**[[5h7p]] – yVps Vta1 N-terminal + yVps46 D1-D2 domain - NMR<br />
**[[4u7e]] – hVps Vta1 N-terminal + IST1<br />
**[[2lxm]] – hVps Vta1 N-terminal + CHMP5<br />
**[[4txq]] – hVps Vta1 N-terminal + CHMP1B<br />
**[[4txr]] – hVps Vta1 N-terminal + CHMP1B + CHMP5<br />
}}
== References ==
== References ==
<references/>
<references/>


[[Category:Topic Page]]
[[Category:Topic Page]]

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Alexander Berchansky
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