6v3d: Difference between revisions

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<SX load='6v3d' size='340' side='right' viewer='molstar' caption='[[6v3d]], [[Resolution|resolution]] 2.95&Aring;' scene=''>
<SX load='6v3d' size='340' side='right' viewer='molstar' caption='[[6v3d]], [[Resolution|resolution]] 2.95&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[6v3d]] is a 29 chain structure with sequence from [http://en.wikipedia.org/wiki/Acinetobacter_baumannii Acinetobacter baumannii], [http://en.wikipedia.org/wiki/Acinetobacter_baumannii_(strain_ab0057) Acinetobacter baumannii (strain ab0057)], [http://en.wikipedia.org/wiki/Acinetobacter_baumannii_ab0057 Acinetobacter baumannii ab0057], [http://en.wikipedia.org/wiki/Acinetobacter_beijerinckii_anc_3835 Acinetobacter beijerinckii anc 3835], [http://en.wikipedia.org/wiki/Acinetobacter_rudis_cip_110305 Acinetobacter rudis cip 110305], [http://en.wikipedia.org/wiki/Acinetobacter_sp._809848 Acinetobacter sp. 809848], [http://en.wikipedia.org/wiki/Acinetobacter_sp._anc_4470 Acinetobacter sp. anc 4470], [http://en.wikipedia.org/wiki/Acinetobacter_sp._cip_102082 Acinetobacter sp. cip 102082], [http://en.wikipedia.org/wiki/Acinetobacter_sp._cip_51.11 Acinetobacter sp. cip 51.11] and [http://en.wikipedia.org/wiki/Acinetobacter_sp._niph_899 Acinetobacter sp. niph 899]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6V3D OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6V3D FirstGlance]. <br>
<table><tr><td colspan='2'>[[6v3d]] is a 29 chain structure with sequence from [http://en.wikipedia.org/wiki/Acinetobacter_baumannii Acinetobacter baumannii], [http://en.wikipedia.org/wiki/Acinetobacter_baumannii_(strain_ab0057) Acinetobacter baumannii (strain ab0057)], [http://en.wikipedia.org/wiki/Acinetobacter_baumannii_ab0057 Acinetobacter baumannii ab0057], [http://en.wikipedia.org/wiki/Acinetobacter_beijerinckii_anc_3835 Acinetobacter beijerinckii anc 3835], [http://en.wikipedia.org/wiki/Acinetobacter_rudis_cip_110305 Acinetobacter rudis cip 110305], [http://en.wikipedia.org/wiki/Acinetobacter_sp._809848 Acinetobacter sp. 809848], [http://en.wikipedia.org/wiki/Acinetobacter_sp._anc_4470 Acinetobacter sp. anc 4470], [http://en.wikipedia.org/wiki/Acinetobacter_sp._cip_102082 Acinetobacter sp. cip 102082], [http://en.wikipedia.org/wiki/Acinetobacter_sp._cip_51.11 Acinetobacter sp. cip 51.11] and [http://en.wikipedia.org/wiki/Acinetobacter_sp._niph_899 Acinetobacter sp. niph 899]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6V3D OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6V3D FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=2MA:2-METHYLADENOSINE-5-MONOPHOSPHATE'>2MA</scene>, <scene name='pdbligand=2MG:2N-METHYLGUANOSINE-5-MONOPHOSPHATE'>2MG</scene>, <scene name='pdbligand=3TD:(1S)-1,4-ANHYDRO-1-(3-METHYL-2,4-DIOXO-1,2,3,4-TETRAHYDROPYRIMIDIN-5-YL)-5-O-PHOSPHONO-D-RIBITOL'>3TD</scene>, <scene name='pdbligand=5MU:5-METHYLURIDINE+5-MONOPHOSPHATE'>5MU</scene>, <scene name='pdbligand=6MZ:N6-METHYLADENOSINE-5-MONOPHOSPHATE'>6MZ</scene>, <scene name='pdbligand=7MG:7N-METHYL-8-HYDROGUANOSINE-5-MONOPHOSPHATE'>7MG</scene>, <scene name='pdbligand=OMG:O2-METHYLGUANOSINE-5-MONOPHOSPHATE'>OMG</scene>, <scene name='pdbligand=OMU:O2-METHYLURIDINE+5-MONOPHOSPHATE'>OMU</scene>, <scene name='pdbligand=PSU:PSEUDOURIDINE-5-MONOPHOSPHATE'>PSU</scene></td></tr>
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=2MA:2-METHYLADENOSINE-5-MONOPHOSPHATE'>2MA</scene>, <scene name='pdbligand=2MG:2N-METHYLGUANOSINE-5-MONOPHOSPHATE'>2MG</scene>, <scene name='pdbligand=3TD:(1S)-1,4-ANHYDRO-1-(3-METHYL-2,4-DIOXO-1,2,3,4-TETRAHYDROPYRIMIDIN-5-YL)-5-O-PHOSPHONO-D-RIBITOL'>3TD</scene>, <scene name='pdbligand=5MU:5-METHYLURIDINE+5-MONOPHOSPHATE'>5MU</scene>, <scene name='pdbligand=6MZ:N6-METHYLADENOSINE-5-MONOPHOSPHATE'>6MZ</scene>, <scene name='pdbligand=7MG:7N-METHYL-8-HYDROGUANOSINE-5-MONOPHOSPHATE'>7MG</scene>, <scene name='pdbligand=OMG:O2-METHYLGUANOSINE-5-MONOPHOSPHATE'>OMG</scene>, <scene name='pdbligand=OMU:O2-METHYLURIDINE+5-MONOPHOSPHATE'>OMU</scene>, <scene name='pdbligand=PSU:PSEUDOURIDINE-5-MONOPHOSPHATE'>PSU</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6v3d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6v3d OCA], [http://pdbe.org/6v3d PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6v3d RCSB], [http://www.ebi.ac.uk/pdbsum/6v3d PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6v3d ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6v3d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6v3d OCA], [http://pdbe.org/6v3d PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6v3d RCSB], [http://www.ebi.ac.uk/pdbsum/6v3d PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6v3d ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==

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