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| </StructureSection> | | </StructureSection> |
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| == 3D Structures of Ribonucleotide reductase ==
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| Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}}
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| {{#tree:id=OrganizedByTopic|openlevels=0|
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| *'''Class Ia ribonucleotide reductase'''
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| *Ribonucleotide reductase large subunit
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| **[[1zyz]], [[1zzd]], [[2cvs]], [[2cvt]], [[2cvu]], [[2cvv]], [[2cvw]], [[2cvx]], [[2cvy]] - yRNR R1 – yeast<BR />
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| **[[1rlr]] - EcRNR R1 – ''Escherichia coli''<br />
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| **[[1mrr]] - EcRNR R1 + Mn<br />
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| **[[5r1r]], [[6r1r]], [[7r1r]], [[1r1r]] – EcRNR R1 (mutant) + R2<br />
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| *''Ribonucleotide reductase large subunit complex''
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| **[[3hnc]] – hRNR M1 + TTP – human<BR />
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| **[[3hnd]] – hRNR M1 + GDP + TTP<BR />
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| **[[3hne]], [[3hnf]] – hRNR M1 + ATP + TTP<BR />
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| **[[2wgh]], [[5d1y]] - hRNR M1 + ATP + Mg<BR />
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| **[[6aui]] - hRNR M1 + ATP + CDP<br />
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| **[[5tus]], [[4x3v]] - hRNR M1 + inhibitor + TTP<br />
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| **[[3paw]] - yRNR R1 + ATP<BR />
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| **[[3k8t]] - yRNR R1 + ADP analog<BR />
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| **[[3s87]] - yRNR R1 + ADP + GTP<br />
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| **[[3s8a]] - yRNR R1 (mutant) + GTP<br />
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| **[[3tba]] - yRNR R1 (mutant) + GTP + ADP<br />
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| **[[3s8b]] - yRNR R1 + AMPPNP + CDP<br />
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| **[[3s8c]], [[3tb9]] - yRNR R1 (mutant) + AMPPNP + CDP<br />
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| **[[2zlf]], [[2zlg]] - yRNR R1 + peptide<BR />
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| **[[2eud]] - yRNR R1 + ligand<BR />
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| **[[3rsr]] – yRNR R1 + inhibitor<br />
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| **[[1qfn]] - EcRNR R1 + glutaredoxin 1<br />
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| *RNR small subunit
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| **[[3hf1]], [[2vux]], [[2uw2]], [[4djn]], [[3olj]] – hRNR M2<BR />
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| **[[3vpm]], [[3vpn]], [[3vpo]] – hRNR M2 (mutant)<br />
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| **[[1w68]], [[1h0n]], [[1h0o]], [[1xsm]] – mRNR R2 – mouse<BR />
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| **[[1smq]], [[1sms]] – yRNR 2<BR />
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| **[[1jk0]] – yRNR Y2+Y4<br />
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| **[[2xof]], [[1av8]], [[1rib]] – EcRNR R2 + Fe2O<BR />
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| **[[2alx]], [[1jqc]], [[1jpr]] - EcRNR R2 + Mn<br />
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| **[[1piy]], [[1r65]], [[1mxr]], [[1xik]] - EcRNR R2 + Fe<br />
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| **[[1piz]], [[1pj0]], [[1pj1]], [[1pim]], [[1piu]], [[1biq]], [[1pfr]] - EcRNR R2 (mutant) + Fe<BR />
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| **[[1yfd]], [[2av8]] - EcRNR R2 (mutant) + Fe2O<br />
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| **[[1pm2]] - EcRNR R2 (mutant) + Mn<br />
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| **[[2p1i]] – RNR R2 – ''Plasmodium yoelii''<BR />
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| **[[2o1z]] - RNR R2 – ''Plasmodium vivax''<BR />
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| **[[4d8f]], [[4d8g]], [[4m1i]] - CtRNR R2 + Fe + Mn<br />
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| **[[1syy]] - CtRNR R2 + Fe + Pb– ''Chlamydia trachomatis''<BR />
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| **[[2ani]] - CtRNR R2 (mutant) + Fe + Pb<BR />
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| **[[4m1h]] - CtRNR R2 <br />
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| **[[1uzr]] – MtRNR R2 – ''Mycobacterium tuberculosis''<BR />
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| **[[2rcc]] – RNR – ''Bacillus halodurans''<br />
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| **[[4n83]] - SsRNR + Mn<br />
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| **[[4hr5]] - GkRNR – ''Geobacillus kaustophilus''<br />
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| **[[5omj]], [[5omk]] - GkRNR + Fe <br />
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| **[[4hr0]], [[4hr4]] - GkRNR + Fe + Mn <br />
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| **[[6f6c]], [[6f6e]], [[6f6f]], [[6f6g]], [[6f6h]], [[6f6k]] - GkRNR (mutant) + Fe + Mn <br />
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| **[[6cwo]], [[6cwq]] - FjRNR + Mn – ''Flavobacterium johnsoniae''<br />
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| *''Ribonucleotide reductase small subunit complex''
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| **[[1w69]] – mRNR R2 + acetate<br />
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| **[[1rsr]], [[1rsv]] - EcRNR R2 (mutant) + Fe + N3<BR />
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| **[[1rnr]] – EcRNR R2 (mutant) + Fe + dopa<BR />
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| **[[5ci4]] – EcRNR R2 (mutant) + Fe2O<br />
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| **[[5ci3]], [[5ci0]], [[5ci1]], [[5ci2]] – EcRNR R2 (mutant) + fluoro-tyrosine + Fe<sub>2</sub>O<br />
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| **[[6cwp]] – FjRNR + Mn + peptide<br />
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| **[[4xbw]] – GkRNR + Mn<br />
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| **[[6i94]] – GkRNR (mutant) + Mn<br />
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| **[[5dco]], [[4xb9]], [[4xbv]] – GkRNR + Fe<br />
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| **[[6i93]] – GkRNR (mutant) + Fe<br />
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| **[5dcr]], [[5dcs]] – GkRNR + Mn + Fe<br />
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| **[[6i90]], [[6i92]], [[6i95]], [[6f6b]], [[6f6l]], [[6f6m]], [[5ekb]] – GkRNR (mutant) + Mn + Fe<br />
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| **[[4ac8]] – MtRNR + Mn + Fe<br />
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| *Ribonucleotide reductase small+large subunit
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| **[[3uus]] - EcRNR R1+ R2 + Fe + ATP<br />
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| **[[4erm]] - EcRNR R1+ R2 + Fe2O + ATP + ADP<br />
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| **[[4erp]] - EcRNR R1+ R2 + Fe2O + ATP<br />
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| **[[2xak]], [[2xap]], [[2xo4]], [[2xo5]] - EcRNR R1 modified+ R2 peptide<BR />
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| **[[2xav]], [[2xaw]], [[2xax]], [[2xay]], [[2xaz]], [[2x0x]] - EcRNR R1 (mutant) modified + R2 peptide<BR />
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| **[[5cns]], [[5cnt]], [[5cnv]], [[5cnu]] - EcRNR R1 + R2 + Fe2O + 2 nucleotides<br />
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| **[[2r1r]] - EcRNR R1 + R2 + TTP<BR />
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| **[[3r1r]] - EcRNR R1 + R2 + AMPPNP<BR />
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| **[[4r1r]] - EcRNR R1 + R2 + GDP + TTP<BR />
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| **[[2bq1]] - StRNR R1+ R2<br />
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| **[[5im3]] - RNR + dATP – ''Pseudomonas aeruginosa''<br />
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| *'''Class Ib RNR''' ; NrdE – large subunit; NrdF – small subunit
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| **[[6cgm]] - BaRNR NrdE – ''Bacillus subtilis''<br />
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| **[[4dr0]] - BaRNR NrdF + Mn <br />
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| **[[6myx]] - BaRNR NrdE + DTP – Cryo EM<br />
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| **[[6mv9]] - BaRNR NrdE + TTP + ADP <br />
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| **[[6mt9]], [[6mve]] - BaRNR NrdE + TTP + ADP + ATP <br />
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| **[[6mw3]] - BaRNR NrdE + NrdF + DTP – Cryo EM<br />
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| **[[6cgn]], [[6cgl]] - BaRNR NrdE + AMP derivative <br />
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| **[[1pem]] - StRNR NrdE – Salmonella typhimurium<br />
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| **[[1peo]], [[1peq]], [[1peu]] - StRNR NrdE + nucleotide<br />
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| **[[2bq1]] - StRNR NrdE + NrdF + Fe + GTP<br />
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| **[[1r2f]] - StRNR NrdF + Fe<br />
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| **[[2r2f]] - StRNR NrdF + Fe2O<br />
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| **[[4dr0]] - BaRNR NrdF + Mn <br />
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| **[[4bmq]], [[4bmr]], [[4bmt]] - BcRNR NrdF + Fe – ''Bacillus cereus''<br />
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| **[[4bmu]] - BcRNR NrdF + Mn<br />
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| **[[4bmo]], [[4bmp]] - BcRNR NrdF + NrdI + Fe + FMN<br />
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| **[[4m1f]] - EcRNR NrdF<br />
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| **[[3n37]] - EcRNR NrdF + Mn<br />
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| **[[3n38]] - EcRNR NrdF + Fe<br />
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| **[[3n39]], [[3n3a]] - EcRNR NrdF + NrdI + Mn + FMN<br />
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| **[[3n3b]] - EcRNR NrdF + NrdI + Mn + FMN + Fe2O<br />
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| **[[4n82]] – SsRNR + FMN – ''Streptococcus sanguinis''<br />
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| **[[4n83]] - SsRNR NrdF + Mn<br />
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| **[[3mjo]] - CaRNR NrdF + Mn - ''Corynebacterium ammoniagenes'' <br />
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| **[[1kgn]], [[1kgo]], [[1kgp]], [[1oqu]], [[3dhz]] - CaRNR NrdF + Fe<br />
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| *'''Class II ribonucleotide reductase'''
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| **[[1xjf]], [[4col]] – TmRNR + DATP – ''Thermotoga maritima''<BR />
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| **[[4coi]], [[4com]], [[4con]] – TmRNR<br />
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| **[[1xjg]], [[1xjk]], [[1xje]], [[1xjn]], [[4coj]] - TmRNR + 2 nucleotides<BR />
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| **[[1xjj]] - TmRNR + GTP<BR />
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| **[[1xjm]] - TmRNR + TTP<BR />
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| **[[3o0n]] - TmRNR + TTP + Co + Mg + deoxyadenosine + B12<br />
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| **[[3o0o]] - TmRNR + TTP + GDP + Mg + deoxyadenosine + B12<br />
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| **[[3o0q]] - TmRNR + TTP + GDP + Mg + adenosine <br />
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| **[[1l1l]] – RNR (mutant) – ''Lactobacillus leichmannii''<br />
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| *'''Class III ribonucleotide reductase'''
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| **[[1h78]], [[1h79]], [[1h7a]], [[1hk8]] – T4RNR (mutant) + nucleotide triphosphate – bacteriophage T4<br />
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| **[[1h7b]] – T4RNR (mutant) <br />
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| **[[4u3e]] – TmRNR large subunit <br />
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| }}
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| == References == | | == References == |
| <references/> | | <references/> |
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| [[Category:Topic Page]] | | [[Category:Topic Page]] |