4c6r: Difference between revisions
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<StructureSection load='4c6r' size='340' side='right'caption='[[4c6r]], [[Resolution|resolution]] 2.05Å' scene=''> | <StructureSection load='4c6r' size='340' side='right'caption='[[4c6r]], [[Resolution|resolution]] 2.05Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[4c6r]] is a 4 chain structure with sequence from [ | <table><tr><td colspan='2'>[[4c6r]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4C6R OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4C6R FirstGlance]. <br> | ||
</td></tr> | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4c6r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4c6r OCA], [https://pdbe.org/4c6r PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4c6r RCSB], [https://www.ebi.ac.uk/pdbsum/4c6r PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4c6r ProSAT]</span></td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | |||
</table> | </table> | ||
== Function == | |||
= | [[https://www.uniprot.org/uniprot/RPS4_ARATH RPS4_ARATH]] Disease resistance (R) protein that specifically recognizes the AvrRps4 type III effector avirulence protein from P.syringae (PubMed:10571887, PubMed:15469494, PubMed:19519800). Resistance proteins guard the plant against pathogens that contain an appropriate avirulence protein via an indirect interaction with this avirulence protein (PubMed:10571887, PubMed:15469494, PubMed:19519800). That triggers a defense system including the hypersensitive response, which restricts the pathogen growth (PubMed:10571887, PubMed:15469494, PubMed:19519800). Probably acts as a NAD(+) hydrolase (NADase): in response to activation, catalyzes cleavage of NAD(+) into ADP-D-ribose (ADPR) and nicotinamide; NAD(+) cleavage triggering a defense system that promotes cell death (PubMed:31439792, PubMed:31439793). The combined presence of both regular and alternative RPS4 transcripts with truncated open reading frames (ORFs) is necessary for function (PubMed:17951452). RPS4 function is regulated at multiple levels, including gene expression, alternative splicing, and protein stability (PubMed:17951452). When over-expressed, confers temperature-conditioned EDS1-dependent auto-immunity (PubMed:24146667). Heterodimerization with RRS1 is required to form a functional complex to recognize AvrRps4 and PopP2 (PubMed:24744375). Abscisic acid deficiency enhances nuclear accumulation of RPS4 and its cell death-inducing activity (PubMed:22454454).<ref>PMID:10571887</ref> <ref>PMID:15469494</ref> <ref>PMID:17951452</ref> <ref>PMID:19519800</ref> <ref>PMID:22454454</ref> <ref>PMID:24146667</ref> <ref>PMID:24744375</ref> <ref>PMID:31439792</ref> <ref>PMID:31439793</ref> <ref>PMID:17951452</ref> <ref>PMID:19519800</ref> | ||
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== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: | [[Category: Arabidopsis thaliana]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
[[Category: Bernoux | [[Category: Bernoux M]] | ||
[[Category: Dodds | [[Category: Dodds PN]] | ||
[[Category: Ericsson | [[Category: Ericsson DJ]] | ||
[[Category: Jones | [[Category: Jones JDG]] | ||
[[Category: Kobe | [[Category: Kobe B]] | ||
[[Category: Ma | [[Category: Ma Y]] | ||
[[Category: Parker | [[Category: Parker J]] | ||
[[Category: Sarris | [[Category: Sarris P]] | ||
[[Category: Saucet | [[Category: Saucet SB]] | ||
[[Category: Segonzac | [[Category: Segonzac C]] | ||
[[Category: Sohn | [[Category: Sohn KH]] | ||
[[Category: Ve | [[Category: Ve T]] | ||
[[Category: Wan | [[Category: Wan L]] | ||
[[Category: Williams | [[Category: Williams SJ]] | ||
[[Category: Zhang | [[Category: Zhang X]] | ||