4br6: Difference between revisions
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<StructureSection load='4br6' size='340' side='right'caption='[[4br6]], [[Resolution|resolution]] 2.00Å' scene=''> | <StructureSection load='4br6' size='340' side='right'caption='[[4br6]], [[Resolution|resolution]] 2.00Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[4br6]] is a 4 chain structure with sequence from [ | <table><tr><td colspan='2'>[[4br6]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Chaetomium_thermophilum Chaetomium thermophilum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4BR6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4BR6 FirstGlance]. <br> | ||
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MN3:MANGANESE+(III)+ION'>MN3</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr> | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MN3:MANGANESE+(III)+ION'>MN3</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr> | ||
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[ | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Superoxide_dismutase Superoxide dismutase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.15.1.1 1.15.1.1] </span></td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4br6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4br6 OCA], [https://pdbe.org/4br6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4br6 RCSB], [https://www.ebi.ac.uk/pdbsum/4br6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4br6 ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | == Function == | ||
[[ | [[https://www.uniprot.org/uniprot/A5JTR7_9PEZI A5JTR7_9PEZI]] Destroys radicals which are normally produced within the cells and which are toxic to biological systems (By similarity). | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
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==See Also== | ==See Also== | ||
*[[Superoxide | *[[Superoxide dismutase 3D structures|Superoxide dismutase 3D structures]] | ||
== References == | == References == | ||
<references/> | <references/> | ||
Revision as of 10:22, 31 August 2022
Crystal structure of Chaetomium thermophilum MnSODCrystal structure of Chaetomium thermophilum MnSOD
Structural highlights
Function[A5JTR7_9PEZI] Destroys radicals which are normally produced within the cells and which are toxic to biological systems (By similarity). Publication Abstract from PubMedA manganese superoxide dismutase from the thermophilic fungus Chaetomium thermophilum (CtMnSOD) was expressed in Pichia pastoris and purified to homogeneity. Its optimal temperature was 60 degrees C with approximately 75% of its activity retained after incubation at 70 degrees C for 60min. Recombinant yeast cells carrying C. thermophilum mnsod gene exhibited higher stress resistance to salt and oxidative stress-inducing agents than control yeast cells. In an effort to provide structural insights, CtMnSOD was crystallized and its structure was determined at 2.0A resolution. The overall architecture of CtMnSOD was found similar to other MnSODs with highest structural similarities obtained against a MnSOD from the thermophilic fungus Aspergillus fumigatus. In order to explain its thermostability, structural and sequence analysis of CtMnSOD with other MnSODs was carried out. An increased number of charged residues and an increase in the number of intersubunit salt bridges and the Thr:Ser ratio were identified as potential reasons for the thermostability of CtMnSOD. Crystal structure and biochemical characterization of a manganese superoxide dismutase from Chaetomium thermophilum.,Haikarainen T, Frioux C, Zhnag LQ, Li DC, Papageorgiou AC Biochim Biophys Acta. 2013 Dec 3. pii: S1570-9639(13)00420-2. doi:, 10.1016/j.bbapap.2013.11.014. PMID:24316252[1] From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine. See AlsoReferences
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