5apr: Difference between revisions

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[[Image:5apr.gif|left|200px]]
[[Image:5apr.gif|left|200px]]


{{Structure
<!--
|PDB= 5apr |SIZE=350|CAPTION= <scene name='initialview01'>5apr</scene>, resolution 2.1&Aring;
The line below this paragraph, containing "STRUCTURE_5apr", creates the "Structure Box" on the page.
|SITE=
You may change the PDB parameter (which sets the PDB file loaded into the applet)
|LIGAND= <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=DHL:2-AMINO-ETHANETHIOL'>DHL</scene>, <scene name='pdbligand=STA:STATINE'>STA</scene>
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Hydrolase Hydrolase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.21.103, 3.4.23.18, 3.4.23.28 and 3.4.23.30 3.4.21.103, 3.4.23.18, 3.4.23.28 and 3.4.23.30] </span>
or leave the SCENE parameter empty for the default display.
|GENE=  
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|DOMAIN=
{{STRUCTURE_5apr| PDB=5apr  | SCENE= }}  
|RELATEDENTRY=
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5apr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5apr OCA], [http://www.ebi.ac.uk/pdbsum/5apr PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=5apr RCSB]</span>
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'''STRUCTURES OF COMPLEXES OF RHIZOPUSPEPSIN WITH PEPSTATIN AND OTHER STATINE-CONTAINING INHIBITORS'''
'''STRUCTURES OF COMPLEXES OF RHIZOPUSPEPSIN WITH PEPSTATIN AND OTHER STATINE-CONTAINING INHIBITORS'''
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==About this Structure==
==About this Structure==
5APR is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/ ]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5APR OCA].  
5APR is a [[Single protein]] structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5APR OCA].  


==Reference==
==Reference==
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[[Category: Davies, D R.]]
[[Category: Davies, D R.]]
[[Category: Suguna, K.]]
[[Category: Suguna, K.]]
[[Category: hydrolase (acid proteinase)]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May  4 22:31:57 2008''
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 05:40:50 2008''

Revision as of 22:31, 4 May 2008

File:5apr.gif

Template:STRUCTURE 5apr

STRUCTURES OF COMPLEXES OF RHIZOPUSPEPSIN WITH PEPSTATIN AND OTHER STATINE-CONTAINING INHIBITORS


OverviewOverview

The three-dimensional structures of the complexes of the aspartic proteinase from Rhizopus chinensis (Rhizopuspepsin, EC 3.4.23.6) with pepstatin and two pepstatin-like peptide inhibitors of renin have been determined by X-ray diffraction methods and refined by restrained least-squares procedures. The inhibitors adopt an extended conformation and lie in the deep groove located between the two domains of the enzyme. Inhibitor binding is accompanied by a conformational change at the "flap," a beta-hairpin loop region, that projects over the binding cleft and closes down over the inhibitor, excluding water molecules from the vicinity of the scissile bond. The hydroxyl group of the central statyl residue of the inhibitors replaces the water molecule found between the two active aspartates, Asp-35 and Asp-218, in the native structure. The refined structures provide additional data to define the specific subsites of the enzyme and also show a system of hydrogen bonding to the inhibitor backbone similar to that observed for a reduced inhibitor.

About this StructureAbout this Structure

5APR is a Single protein structure. Full crystallographic information is available from OCA.

ReferenceReference

Structures of complexes of rhizopuspepsin with pepstatin and other statine-containing inhibitors., Suguna K, Padlan EA, Bott R, Boger J, Parris KD, Davies DR, Proteins. 1992 Jul;13(3):195-205. PMID:1603809 Page seeded by OCA on Sun May 4 22:31:57 2008

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