6cep: Difference between revisions

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==Sus scrofa heart L-lactate dehydrogenase ternary complex with NADH and oxamate==
==Sus scrofa heart L-lactate dehydrogenase ternary complex with NADH and oxamate==
<StructureSection load='6cep' size='340' side='right' caption='[[6cep]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
<StructureSection load='6cep' size='340' side='right'caption='[[6cep]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[6cep]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Sus_scrofa Sus scrofa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6CEP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6CEP FirstGlance]. <br>
<table><tr><td colspan='2'>[[6cep]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Sus_scrofa Sus scrofa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6CEP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6CEP FirstGlance]. <br>
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==See Also==
==See Also==
*[[Lactate Dehydrogenase|Lactate Dehydrogenase]]
*[[Lactate dehydrogenase 3D structures|Lactate dehydrogenase 3D structures]]
== References ==
== References ==
<references/>
<references/>
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</StructureSection>
</StructureSection>
[[Category: L-lactate dehydrogenase]]
[[Category: L-lactate dehydrogenase]]
[[Category: Large Structures]]
[[Category: Sus scrofa]]
[[Category: Sus scrofa]]
[[Category: Andrews, B]]
[[Category: Andrews, B]]

Revision as of 13:44, 1 January 2020

Sus scrofa heart L-lactate dehydrogenase ternary complex with NADH and oxamateSus scrofa heart L-lactate dehydrogenase ternary complex with NADH and oxamate

Structural highlights

6cep is a 4 chain structure with sequence from Sus scrofa. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:,
Activity:L-lactate dehydrogenase, with EC number 1.1.1.27
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Publication Abstract from PubMed

Lactate dehydrogenase (LDH) has recently garnered attention as an attractive target for cancer therapies, owing to the enzyme's critical role in cellular metabolism. Current inhibition strategies, employing substrate or cofactor analogues, are insufficiently specific for use as pharmaceutical agents. The possibility of allosteric inhibition of LDH was postulated on the basis of theoretical docking studies of a small molecule inhibitor to LDH. The present study examined structural analogues of this proposed inhibitor to gauge its potency and attempt to elucidate the molecular mechanism of action. These analogues display encouraging in vitro inhibition of porcine heart LDH, including micromolar Ki values and a maximum inhibition of up to 50% in the steady state. Furthermore, Michaelis-Menten kinetics and fluorescence data both suggest the simple, acetaminophen derivatives are non-competitive in binding to the enzyme. Kinetic comparisons of a panel of increasingly decorated structural analogues imply that the binding is specific, and the small molecule core provides a privileged scaffold for further pharmaceutical development of a novel, allosteric drug.

Small molecule cores demonstrate non-competitive inhibition of lactate dehydrogenase.,Andrews BA, Dyer RB Medchemcomm. 2018 Jul 13;9(8):1369-1376. doi: 10.1039/c8md00309b. eCollection, 2018 Aug 1. PMID:30151092[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

See Also

References

  1. Andrews BA, Dyer RB. Small molecule cores demonstrate non-competitive inhibition of lactate dehydrogenase. Medchemcomm. 2018 Jul 13;9(8):1369-1376. doi: 10.1039/c8md00309b. eCollection, 2018 Aug 1. PMID:30151092 doi:http://dx.doi.org/10.1039/c8md00309b

6cep, resolution 2.00Å

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