2c3x: Difference between revisions
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[[Image:2c3x.gif|left|200px]]<br /> | [[Image:2c3x.gif|left|200px]]<br /><applet load="2c3x" size="450" color="white" frame="true" align="right" spinBox="true" | ||
<applet load="2c3x" size="450" color="white" frame="true" align="right" spinBox="true" | |||
caption="2c3x, resolution 2.70Å" /> | caption="2c3x, resolution 2.70Å" /> | ||
'''STRUCTURE OF IODINATED CBM25 FROM BACILLUS HALODURANS AMYLASE IN COMPLEX WITH MALTOTETRAOSE'''<br /> | '''STRUCTURE OF IODINATED CBM25 FROM BACILLUS HALODURANS AMYLASE IN COMPLEX WITH MALTOTETRAOSE'''<br /> | ||
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==About this Structure== | ==About this Structure== | ||
2C3X is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Bacillus_halodurans Bacillus halodurans] with SO4 as [http://en.wikipedia.org/wiki/ligand ligand]. | 2C3X is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Bacillus_halodurans Bacillus halodurans] with SO4 as [http://en.wikipedia.org/wiki/ligand ligand]. Known structural/functional Site: <scene name='pdbsite=AC1:So4 Binding Site For Chain A'>AC1</scene>. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=2C3X OCA]. | ||
==Reference== | ==Reference== | ||
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[[Category: starch binding]] | [[Category: starch binding]] | ||
''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on | ''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Tue Dec 18 19:08:39 2007'' | ||
Revision as of 19:58, 18 December 2007
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STRUCTURE OF IODINATED CBM25 FROM BACILLUS HALODURANS AMYLASE IN COMPLEX WITH MALTOTETRAOSE
OverviewOverview
Starch-hydrolyzing enzymes lacking alpha-glucan-specific, carbohydrate-binding modules (CBMs) typically have lowered activity on, granular starch relative to their counterparts with CBMs. Thus, consideration of starch recognition by CBMs is a key factor in, understanding granular starch hydrolysis. To this end, we have dissected, the modular structure of the maltohexaose-forming amylase from Bacillus, halodurans (C-125). This five-module protein comprises an N-terminal, family 13 catalytic module followed in order by two modules of unknown, function, a family 26 CBM (BhCBM26), and a family 25 CBM (BhCBM25). Here, we present a comprehensive structure-function analysis of starch and, alpha-glucooligosaccharide recognition by BhCBM25 and BhCBM26 using UV, methods, isothermal titration calorimetry, and x-ray crystallography. The, results reveal that the two CBMs bind alpha-glucooligosaccharides, particularly those containing alpha-1,6 linkages, with different, affinities but have similar abilities to bind granular starch. Notably, these CBMs appear to recognize the same binding sites in granular starch., The enhanced affinity of the tandem CBMs for granular starch is suggested, to be the main biological advantage for this enzyme to contain two CBMs., Structural studies of the native and ligand-bound forms of BhCBM25 and, BhCBM26 show a structurally conserved mode of ligand recognition but, through non-sequence-conserved residues. Comparison of these CBM, structures with other starch-specific CBM structures reveals a generally, conserved mode of starch recognition.
About this StructureAbout this Structure
2C3X is a Single protein structure of sequence from Bacillus halodurans with SO4 as ligand. Known structural/functional Site: . Full crystallographic information is available from OCA.
ReferenceReference
A structural and functional analysis of alpha-glucan recognition by family 25 and 26 carbohydrate-binding modules reveals a conserved mode of starch recognition., Boraston AB, Healey M, Klassen J, Ficko-Blean E, Lammerts van Bueren A, Law V, J Biol Chem. 2006 Jan 6;281(1):587-98. Epub 2005 Oct 17. PMID:16230347
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