3b38: Difference between revisions

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[[Image:3b38.jpg|left|200px]]
[[Image:3b38.jpg|left|200px]]


{{Structure
<!--
|PDB= 3b38 |SIZE=350|CAPTION= <scene name='initialview01'>3b38</scene>, resolution 1.85&Aring;
The line below this paragraph, containing "STRUCTURE_3b38", creates the "Structure Box" on the page.
|SITE= <scene name='pdbsite=AC1:Edo+Binding+Site+For+Residue+A+190'>AC1</scene>, <scene name='pdbsite=AC2:Edo+Binding+Site+For+Residue+A+191'>AC2</scene>, <scene name='pdbsite=AC3:Edo+Binding+Site+For+Residue+A+192'>AC3</scene>, <scene name='pdbsite=AC4:Edo+Binding+Site+For+Residue+A+193'>AC4</scene>, <scene name='pdbsite=AC5:Edo+Binding+Site+For+Residue+A+194'>AC5</scene>, <scene name='pdbsite=AC6:Edo+Binding+Site+For+Residue+A+195'>AC6</scene> and <scene name='pdbsite=AC7:Edo+Binding+Site+For+Residue+A+196'>AC7</scene>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
|LIGAND= <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
|ACTIVITY=
or leave the SCENE parameter empty for the default display.
|GENE= PARK7 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])
-->
|DOMAIN=
{{STRUCTURE_3b38|  PDB=3b38 |  SCENE= }}  
|RELATEDENTRY=[[2rk3|2RK3]], [[2rk4|2RK4]], [[2rk6|2RK6]], [[3b36|3B36]]
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3b38 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3b38 OCA], [http://www.ebi.ac.uk/pdbsum/3b38 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=3b38 RCSB]</span>
}}


'''Structure of A104V DJ-1'''
'''Structure of A104V DJ-1'''
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[[Category: Wilson, M A.]]
[[Category: Wilson, M A.]]
[[Category: Zhou, W.]]
[[Category: Zhou, W.]]
[[Category: chaperone]]
[[Category: Chaperone]]
[[Category: cytoplasm]]
[[Category: Cytoplasm]]
[[Category: disease mutation]]
[[Category: Disease mutation]]
[[Category: nucleus]]
[[Category: Nucleus]]
[[Category: oncogene]]
[[Category: Oncogene]]
[[Category: oxidation]]
[[Category: Oxidation]]
[[Category: parkinson disease]]
[[Category: Parkinson disease]]
[[Category: parkinson's disease]]
[[Category: Parkinson's disease]]
[[Category: pfpi]]
[[Category: Pfpi]]
[[Category: phosphorylation]]
[[Category: Phosphorylation]]
[[Category: polymorphism]]
[[Category: Polymorphism]]
[[Category: thij]]
[[Category: Thij]]
[[Category: ubl conjugation]]
[[Category: Ubl conjugation]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May  4 20:21:12 2008''
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 05:22:43 2008''

Revision as of 20:21, 4 May 2008

File:3b38.jpg

Template:STRUCTURE 3b38

Structure of A104V DJ-1


OverviewOverview

A number of missense mutations in the oxidative stress response protein DJ-1 are implicated in rare forms of familial Parkinsonism. The best-characterized Parkinsonian DJ-1 missense mutation, L166P, disrupts homodimerization and results in a poorly folded protein. The molecular basis by which the other Parkinsonism-associated mutations disrupt the function of DJ-1, however, is incompletely understood. In this study we show that three different Parkinsonism-associated DJ-1 missense mutations (A104T, E163K, and M26I) reduce the thermal stability of DJ-1 in solution by subtly perturbing the structure of DJ-1 without causing major folding defects or loss of dimerization. Atomic resolution X-ray crystallography shows that the A104T substitution introduces water and a discretely disordered residue into the core of the protein, E163K disrupts a key salt bridge with R145, and M26I causes packing defects in the core of the dimer. The deleterious effect of each Parkinsonism-associated mutation on DJ-1 is dissected by analysis of engineered substitutions (M26L, A104V, and E163K/R145E) that partially alleviate each of the defects introduced by the A104T, E163K and M26I mutations. In total, our results suggest that the protective function of DJ-1 can be compromised by diverse perturbations in its structural integrity, particularly near the junctions of secondary structural elements.

DiseaseDisease

Known disease associated with this structure: Amyotrophic lateral sclerosis-Parkinsonism/dementia complex 2 OMIM:[602533], Parkinson disease 7, autosomal recessive early-onset OMIM:[602533]

About this StructureAbout this Structure

3B38 is a Single protein structure of sequence from Homo sapiens. Full crystallographic information is available from OCA.

ReferenceReference

Structural Impact of Three Parkinsonism-Associated Missense Mutations on Human DJ-1(,)., Lakshminarasimhan M, Maldonado MT, Zhou W, Fink AL, Wilson MA, Biochemistry. 2008 Feb 5;47(5):1381-92. Epub 2008 Jan 9. PMID:18181649 Page seeded by OCA on Sun May 4 20:21:12 2008

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