3dqh: Difference between revisions
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==Structure of the Yellow Fluorescent Protein Citrine Frozen at 1000 Atmospheres Number 5: Structure 9 in a Series of 26 High Pressure Structures== | ==Structure of the Yellow Fluorescent Protein Citrine Frozen at 1000 Atmospheres Number 5: Structure 9 in a Series of 26 High Pressure Structures== | ||
<StructureSection load='3dqh' size='340' side='right' caption='[[3dqh]], [[Resolution|resolution]] 1.45Å' scene=''> | <StructureSection load='3dqh' size='340' side='right'caption='[[3dqh]], [[Resolution|resolution]] 1.45Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[3dqh]] is a 1 chain structure with sequence from [ | <table><tr><td colspan='2'>[[3dqh]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Aeqvi Aeqvi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DQH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DQH FirstGlance]. <br> | ||
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CR2:{(4Z)-2-(AMINOMETHYL)-4-[(4-HYDROXYPHENYL)METHYLIDENE]-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL}ACETIC+ACID'>CR2</scene></td></tr> | </td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CR2:{(4Z)-2-(AMINOMETHYL)-4-[(4-HYDROXYPHENYL)METHYLIDENE]-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL}ACETIC+ACID'>CR2</scene></td></tr> | ||
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1huy|1huy]], [[1yfp|1yfp]], [[2yfp|2yfp]], [[1f0b|1f0b]], [[1f09|1f09]], [[3dpw|3dpw]], [[3dpx|3dpx]], [[3dpz|3dpz]], [[3dq1|3dq1]], [[3dq2|3dq2]], [[3dq3|3dq3]], [[3dq4|3dq4]], [[3dq5|3dq5]], [[3dq6|3dq6]], [[3dq7|3dq7]], [[3dq8|3dq8]], [[3dq9|3dq9]], [[3dqa|3dqa]], [[3dqc|3dqc]], [[3dqd|3dqd]], [[3dqe|3dqe]], [[3dqf|3dqf]], [[3dqi|3dqi]], [[3dqj|3dqj]], [[3dqk|3dqk]], [[3dql|3dql]], [[3dqm|3dqm]], [[3dqn|3dqn]], [[3dqo|3dqo]], [[3dqu|3dqu]]</td></tr> | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1huy|1huy]], [[1yfp|1yfp]], [[2yfp|2yfp]], [[1f0b|1f0b]], [[1f09|1f09]], [[3dpw|3dpw]], [[3dpx|3dpx]], [[3dpz|3dpz]], [[3dq1|3dq1]], [[3dq2|3dq2]], [[3dq3|3dq3]], [[3dq4|3dq4]], [[3dq5|3dq5]], [[3dq6|3dq6]], [[3dq7|3dq7]], [[3dq8|3dq8]], [[3dq9|3dq9]], [[3dqa|3dqa]], [[3dqc|3dqc]], [[3dqd|3dqd]], [[3dqe|3dqe]], [[3dqf|3dqf]], [[3dqi|3dqi]], [[3dqj|3dqj]], [[3dqk|3dqk]], [[3dql|3dql]], [[3dqm|3dqm]], [[3dqn|3dqn]], [[3dqo|3dqo]], [[3dqu|3dqu]]</div></td></tr> | ||
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">GFP ([ | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">GFP ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=6100 AEQVI])</td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dqh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dqh OCA], [https://pdbe.org/3dqh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dqh RCSB], [https://www.ebi.ac.uk/pdbsum/3dqh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dqh ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | == Function == | ||
[[ | [[https://www.uniprot.org/uniprot/GFP_AEQVI GFP_AEQVI]] Energy-transfer acceptor. Its role is to transduce the blue chemiluminescence of the protein aequorin into green fluorescent light by energy transfer. Fluoresces in vivo upon receiving energy from the Ca(2+)-activated photoprotein aequorin. | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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==See Also== | ==See Also== | ||
*[[Green Fluorescent Protein|Green Fluorescent Protein]] | *[[Green Fluorescent Protein 3D structures|Green Fluorescent Protein 3D structures]] | ||
== References == | == References == | ||
<references/> | <references/> | ||
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</StructureSection> | </StructureSection> | ||
[[Category: Aeqvi]] | [[Category: Aeqvi]] | ||
[[Category: Large Structures]] | |||
[[Category: Barstow, B]] | [[Category: Barstow, B]] | ||
[[Category: Kim, C U]] | [[Category: Kim, C U]] |