3a1w: Difference between revisions

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==Crystal structue of the G domain of T. maritima FeoB iron iransporter==
==Crystal structue of the G domain of T. maritima FeoB iron iransporter==
<StructureSection load='3a1w' size='340' side='right' caption='[[3a1w]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
<StructureSection load='3a1w' size='340' side='right'caption='[[3a1w]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3a1w]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_43589 Atcc 43589]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3A1W OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3A1W FirstGlance]. <br>
<table><tr><td colspan='2'>[[3a1w]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Atcc_43589 Atcc 43589]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3A1W OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3A1W FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3ais|3ais]], [[3ait|3ait]], [[3aiu|3aiu]], [[3aiv|3aiv]]</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3ais|3ais]], [[3ait|3ait]], [[3aiu|3aiu]], [[3aiv|3aiv]]</div></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">TM0051 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2336 ATCC 43589])</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">TM0051 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2336 ATCC 43589])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3a1w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3a1w OCA], [http://pdbe.org/3a1w PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3a1w RCSB], [http://www.ebi.ac.uk/pdbsum/3a1w PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3a1w ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3a1w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3a1w OCA], [https://pdbe.org/3a1w PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3a1w RCSB], [https://www.ebi.ac.uk/pdbsum/3a1w PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3a1w ProSAT]</span></td></tr>
</table>
</table>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
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</StructureSection>
</StructureSection>
[[Category: Atcc 43589]]
[[Category: Atcc 43589]]
[[Category: Large Structures]]
[[Category: Hattori, M]]
[[Category: Hattori, M]]
[[Category: Ishitani, R]]
[[Category: Ishitani, R]]

Revision as of 19:14, 22 December 2021

Crystal structue of the G domain of T. maritima FeoB iron iransporterCrystal structue of the G domain of T. maritima FeoB iron iransporter

Structural highlights

3a1w is a 1 chain structure with sequence from Atcc 43589. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:
Gene:TM0051 (ATCC 43589)
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

Publication Abstract from PubMed

The FeoB family proteins are widely distributed prokaryotic membrane proteins involved in Fe(2+) uptake. FeoB consists of N-terminal cytosolic and C-terminal transmembrane domains. The N-terminal region of the cytosolic domain is homologous to small GTPase (G) proteins and is considered to regulate Fe(2+) uptake. The spacer region connecting the G and TM domains reportedly functions as a GDP dissociation inhibitor (GDI)-like domain that stabilizes the GDP-binding state. However, the function of the G and GDI-like domains in iron uptake remains unclear. Here, we report the structural and functional analyses of the FeoB cytosolic domain from Thermotoga maritima. The structure-based mutational analysis indicated that the interaction between the G and GDI-like domains is important for both the GDI and Fe(2+) uptake activities. On the basis of these results, we propose a regulatory mechanism of Fe(2+) uptake.

Structural basis of novel interactions between the small-GTPase and GDI-like domains in prokaryotic FeoB iron transporter.,Hattori M, Jin Y, Nishimasu H, Tanaka Y, Mochizuki M, Uchiumi T, Ishitani R, Ito K, Nureki O Structure. 2009 Oct 14;17(10):1345-55. Epub 2009 Sep 3. PMID:19733088[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

  1. Hattori M, Jin Y, Nishimasu H, Tanaka Y, Mochizuki M, Uchiumi T, Ishitani R, Ito K, Nureki O. Structural basis of novel interactions between the small-GTPase and GDI-like domains in prokaryotic FeoB iron transporter. Structure. 2009 Oct 14;17(10):1345-55. Epub 2009 Sep 3. PMID:19733088 doi:10.1016/j.str.2009.08.007

3a1w, resolution 1.90Å

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