Proteopedia

Proteopedia:Wishlist: Difference between revisions

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Jaime Prilusky (talk | contribs)
ConfirmAccount, Editor, Journal, Mutation, Next, Print3D, Tester, any2jmol, Bureaucrats, Administrators
7,873 edits
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Jaime Prilusky (talk | contribs)
ConfirmAccount, Editor, Journal, Mutation, Next, Print3D, Tester, any2jmol, Bureaucrats, Administrators
7,873 edits
No edit summary
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===Items Awaiting Solutions (SAT)===
===Items Awaiting Solutions (SAT)===
* <span style="background-color:yellow;color:green">'''SOLVED:'''</span> When loading a scene in the SAT, show the caption so it becomes possible to edit it rather than rewrite it. When clicking on a new green link, overwrite the old caption even if the new scene has an empty caption. --[[User:Karsten Theis|Karsten Theis]] 15:04, 13 October 2018 (UTC) [[User:Jaime Prilusky|Jaime Prilusky]] 11:34, 17 October 2018 (UTC)
* Add some links to useful sites. --[[User:Angel Herraez|Angel_Herraez]] 11:47, 30 January 2018 (UTC)
* Add some links to useful sites. --[[User:Angel Herraez|Angel_Herraez]] 11:47, 30 January 2018 (UTC)


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* Advanced load option for large assemblies e.g. viruses: <code>load filter "bychain"</code> -- one dummy atom per chain. --[[User:Angel Herraez|Angel_Herraez]] 11:57, 30 January 2018 (UTC)
* Advanced load option for large assemblies e.g. viruses: <code>load filter "bychain"</code> -- one dummy atom per chain. --[[User:Angel Herraez|Angel_Herraez]] 11:57, 30 January 2018 (UTC)
* <span style="background-color:yellow;color:green">'''SOLVED:'''</span> Add capability to the SAT for creating scenes of biological assemblies. Verify match between model used by the applet tag and that used by the SAT (maybe getLatestStructure vs. getFrozenStructure). [[User:Angel Herraez|Angel_Herraez]] 14:18, 19 June 2017 (UTC) [[User:Jaime Prilusky|Jaime Prilusky]] 11:34, 17 October 2018 (UTC)
: In the applet tag, now it is possible to indicate if to load Asymmetric Unit or Biological Assembly (i.e. load=2ace_au load=2ace_ba). So the same mechanism could be used in the SAT, if we '''add a pair of radio buttons''' beside the "PDB code" slot. Need to take care of default and maybe what to do if the particular file does not exist. [[User:Angel Herraez|Angel_Herraez]] 11:06, 20 August 2017 (UTC)
* Review the correct functioning of scene transitions. [[User:Angel Herraez|Angel_Herraez]] 14:18, 19 June 2017 (UTC)


* When a scene is open for editing, it should remember the transition options that were used for it. --[[User:Angel Herraez|Angel_Herraez]] 11:56, 5 September 2017 (UTC)
* When a scene is open for editing, it should remember the transition options that were used for it. --[[User:Angel Herraez|Angel_Herraez]] 11:56, 5 September 2017 (UTC)
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===Items Solved (SAT)===
===Items Solved (SAT)===
* <span style="background-color:yellow;color:green">'''SOLVED:'''</span> Review the correct functioning of scene transitions. [[User:Angel Herraez|Angel_Herraez]] 14:18, 19 June 2017 (UTC) [[User:Jaime Prilusky|Jaime Prilusky]] 11:39, 17 October 2018 (UTC)
* <span style="background-color:yellow;color:green">'''SOLVED:'''</span> When loading a scene in the SAT, show the caption so it becomes possible to edit it rather than rewrite it. When clicking on a new green link, overwrite the old caption even if the new scene has an empty caption. --[[User:Karsten Theis|Karsten Theis]] 15:04, 13 October 2018 (UTC) [[User:Jaime Prilusky|Jaime Prilusky]] 11:34, 17 October 2018 (UTC)
* <span style="background-color:yellow;color:green">'''SOLVED:'''</span> Add capability to the SAT for creating scenes of biological assemblies. Verify match between model used by the applet tag and that used by the SAT (maybe getLatestStructure vs. getFrozenStructure). [[User:Angel Herraez|Angel_Herraez]] 14:18, 19 June 2017 (UTC) [[User:Jaime Prilusky|Jaime Prilusky]] 11:34, 17 October 2018 (UTC)
: In the applet tag, now it is possible to indicate if to load Asymmetric Unit or Biological Assembly (i.e. load=2ace_au load=2ace_ba). So the same mechanism could be used in the SAT, if we '''add a pair of radio buttons''' beside the "PDB code" slot. Need to take care of default and maybe what to do if the particular file does not exist. [[User:Angel Herraez|Angel_Herraez]] 11:06, 20 August 2017 (UTC)


*<span style="background-color:yellow;color:green">'''SOLVED:'''</span> Create a "reset" button for scene authoring tools, in particular the representations tab.  Or '''an "undo" button'''.  Something to allow the image to be returned to normal after experimenting with different representations without reloading. [[User:Emily Forschler|Emily Forschler]] 00:07, 6 June 2008 (IDT)  
*<span style="background-color:yellow;color:green">'''SOLVED:'''</span> Create a "reset" button for scene authoring tools, in particular the representations tab.  Or '''an "undo" button'''.  Something to allow the image to be returned to normal after experimenting with different representations without reloading. [[User:Emily Forschler|Emily Forschler]] 00:07, 6 June 2008 (IDT)  

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

Eran Hodis, Eric Martz, Emily Forschler, Kevin Karplus, Jaime Prilusky, Greg Black, Ralf Stephan, Karl Oberholser, Angel Herraez, Karsten Theis
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