2q5u: Difference between revisions

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[[Image:2q5u.gif|left|200px]]
[[Image:2q5u.gif|left|200px]]


{{Structure
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{{STRUCTURE_2q5u| PDB=2q5u  | SCENE= }}  
|RELATEDENTRY=[[1czq|1CZQ]], [[2q3i|2Q3I]]
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2q5u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2q5u OCA], [http://www.ebi.ac.uk/pdbsum/2q5u PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2q5u RCSB]</span>
}}


'''Crystal structure of IQN17'''
'''Crystal structure of IQN17'''
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==About this Structure==
==About this Structure==
2Q5U is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/ ]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Q5U OCA].  
2Q5U is a [[Single protein]] structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Q5U OCA].  


==Reference==
==Reference==
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[[Category: Kim, P S.]]
[[Category: Kim, P S.]]
[[Category: Malashkevich, V N.]]
[[Category: Malashkevich, V N.]]
[[Category: coiled coil]]
[[Category: Coiled coil]]
[[Category: envelope glycoprotein]]
[[Category: Envelope glycoprotein]]
[[Category: viral protein/viral protein inhibitor]]
[[Category: Viral protein/viral protein inhibitor]]
 
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Revision as of 14:24, 4 May 2008

File:2q5u.gif

Template:STRUCTURE 2q5u

Crystal structure of IQN17


OverviewOverview

The HIV-1 gp41 protein promotes viral entry by mediating the fusion of viral and cellular membranes. A prominent pocket on the surface of a central trimeric coiled coil within gp41 was previously identified as a potential target for drugs that inhibit HIV-1 entry. We designed a peptide, IQN17, which properly presents this pocket. Utilizing IQN17 and mirror-image phage display, we identified cyclic, D-peptide inhibitors of HIV-1 infection that share a sequence motif. A 1.5 A cocrystal structure of IQN17 in complex with a D-peptide, and NMR studies, show that conserved residues of these inhibitors make intimate contact with the gp41 pocket. Our studies validate the pocket per se as a target for drug development. IQN17 and these D-peptide inhibitors are likely to be useful for development and identification of a new class of orally bioavailable anti-HIV drugs.

About this StructureAbout this Structure

2Q5U is a Single protein structure. Full crystallographic information is available from OCA.

ReferenceReference

Inhibiting HIV-1 entry: discovery of D-peptide inhibitors that target the gp41 coiled-coil pocket., Eckert DM, Malashkevich VN, Hong LH, Carr PA, Kim PS, Cell. 1999 Oct 1;99(1):103-15. PMID:10520998 Page seeded by OCA on Sun May 4 14:24:42 2008

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