2ohp: Difference between revisions

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[[Image:2ohp.jpg|left|200px]]
[[Image:2ohp.jpg|left|200px]]


{{Structure
<!--
|PDB= 2ohp |SIZE=350|CAPTION= <scene name='initialview01'>2ohp</scene>, resolution 2.25&Aring;
The line below this paragraph, containing "STRUCTURE_2ohp", creates the "Structure Box" on the page.
|SITE=
You may change the PDB parameter (which sets the PDB file loaded into the applet)  
|LIGAND= <scene name='pdbligand=6IP:6-[2-(1H-INDOL-6-YL)ETHYL]PYRIDIN-2-AMINE'>6IP</scene>, <scene name='pdbligand=DMS:DIMETHYL+SULFOXIDE'>DMS</scene>, <scene name='pdbligand=IOD:IODIDE+ION'>IOD</scene>
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Memapsin_2 Memapsin 2], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.23.46 3.4.23.46] </span>
or leave the SCENE parameter empty for the default display.
|GENE= BACE1, BACE ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])
-->
|DOMAIN=
{{STRUCTURE_2ohp|  PDB=2ohp |  SCENE= }}  
|RELATEDENTRY=[[2of0|2OF0]], [[2ohk|2OHK]], [[2ohl|2OHL]], [[2ohm|2OHM]], [[2ohn|2OHN]], [[2ohq|2OHQ]], [[2ohr|2OHR]], [[2ohs|2OHS]], [[2oht|2OHT]], [[2ohu|2OHU]]
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ohp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ohp OCA], [http://www.ebi.ac.uk/pdbsum/2ohp PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2ohp RCSB]</span>
}}


'''X-ray crystal structure of beta secretase complexed with compound 3'''
'''X-ray crystal structure of beta secretase complexed with compound 3'''
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[[Category: Single protein]]
[[Category: Single protein]]
[[Category: Patel, S.]]
[[Category: Patel, S.]]
[[Category: alternative splicing]]
[[Category: Alternative splicing]]
[[Category: alzheimer's disease]]
[[Category: Alzheimer's disease]]
[[Category: aspartic protease]]
[[Category: Aspartic protease]]
[[Category: aspartyl protease]]
[[Category: Aspartyl protease]]
[[Category: base]]
[[Category: Base]]
[[Category: beta-secretase]]
[[Category: Beta-secretase]]
[[Category: glycoprotein]]
[[Category: Glycoprotein]]
[[Category: hydrolase]]
[[Category: Hydrolase]]
[[Category: memapsin 2]]
[[Category: Memapsin 2]]
[[Category: signal]]
[[Category: Signal]]
[[Category: transmembrane]]
[[Category: Transmembrane]]
[[Category: zymogen]]
[[Category: Zymogen]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May  4 10:56:42 2008''
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 04:18:02 2008''

Revision as of 10:56, 4 May 2008

File:2ohp.jpg

Template:STRUCTURE 2ohp

X-ray crystal structure of beta secretase complexed with compound 3


OverviewOverview

Fragment-based lead discovery has been successfully applied to the aspartyl protease enzyme beta-secretase (BACE-1). Fragment hits that contained an aminopyridine motif binding to the two catalytic aspartic acid residues in the active site of the enzyme were the chemical starting points. Structure-based design approaches have led to identification of low micromolar lead compounds that retain these interactions and additionally occupy adjacent hydrophobic pockets of the active site. These leads form two subseries, for which compounds 4 (IC50 = 25 microM) and 6c (IC50 = 24 microM) are representative. In the latter series, further optimization has led to 8a (IC50 = 690 nM).

About this StructureAbout this Structure

2OHP is a Single protein structure of sequence from Homo sapiens. Full crystallographic information is available from OCA.

ReferenceReference

Application of fragment screening by X-ray crystallography to the discovery of aminopyridines as inhibitors of beta-secretase., Congreve M, Aharony D, Albert J, Callaghan O, Campbell J, Carr RA, Chessari G, Cowan S, Edwards PD, Frederickson M, McMenamin R, Murray CW, Patel S, Wallis N, J Med Chem. 2007 Mar 22;50(6):1124-32. Epub 2007 Feb 22. PMID:17315857 Page seeded by OCA on Sun May 4 10:56:42 2008

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OCA