5hpi: Difference between revisions

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 ==Crystal Structure of the Double Mutant of PobR Transcription Factor Inducer Binding Domain-3-Hydroxy Benzoic Acid complex from Acinetobacter==
-<StructureSection load='5hpi' size='340' side='right' caption='[[5hpi]], [[Resolution|resolution]] 2.96&Aring;' scene=''>
+<StructureSection load='5hpi' size='340' side='right'caption='[[5hpi]], [[Resolution|resolution]] 2.96&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[5hpi]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Aciad Aciad]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5HPI OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5HPI FirstGlance]. <br>
+<table><tr><td colspan='2'>[[5hpi]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Acinetobacter_baylyi_ADP1 Acinetobacter baylyi ADP1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5HPI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5HPI FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=3HB:3-HYDROXYBENZOIC+ACID'>3HB</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.963&#8491;</td></tr>
-<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=3HB:3-HYDROXYBENZOIC+ACID'>3HB</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5hpf|5hpf]]</td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5hpi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5hpi OCA], [https://pdbe.org/5hpi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5hpi RCSB], [https://www.ebi.ac.uk/pdbsum/5hpi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5hpi ProSAT]</span></td></tr>
-<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">pobR, ACIAD1718 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=62977 ACIAD])</td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5hpi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5hpi OCA], [http://pdbe.org/5hpi PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5hpi RCSB], [http://www.ebi.ac.uk/pdbsum/5hpi PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5hpi ProSAT]</span></td></tr>
 </table>
 == Function ==
-[[http://www.uniprot.org/uniprot/POBR_ACIAD POBR_ACIAD]] Positive regulator of the pobA gene for p-hydroxybenzoate hydroxylase.
+[https://www.uniprot.org/uniprot/POBR_ACIAD POBR_ACIAD] Positive regulator of the pobA gene for p-hydroxybenzoate hydroxylase.
 <div style="background-color:#fffaf0;">
 == Publication Abstract from PubMed ==
@@ Line 25: / Line 23: @@
 __TOC__
 </StructureSection>
-[[Category: Aciad]]
+[[Category: Acinetobacter baylyi ADP1]]
-[[Category: Jedrejczak, R]]
+[[Category: Large Structures]]
-[[Category: Jha, R]]
+[[Category: Jedrejczak R]]
-[[Category: Joachimiak, A]]
+[[Category: Jha R]]
-[[Category: Kim, Y]]
+[[Category: Joachimiak A]]
-[[Category: Strauss, C E.M]]
+[[Category: Kim Y]]
-[[Category: Tesar, C]]
+[[Category: Strauss CEM]]
-[[Category: Ligand binding domain]]
+[[Category: Tesar C]]
-[[Category: Transcription]]
-[[Category: Transcription factor]]