User:Andrea Foote/Sandbox 1: Difference between revisions

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You may include any references to papers as in: the use of JSmol in Proteopedia <ref>DOI 10.1002/ijch.201300024</ref> or to the article describing Jmol <ref>PMID:21638687</ref> to the rescue.
You may include any references to papers as in: the use of JSmol in Proteopedia <ref>DOI 10.1002/ijch.201300024</ref> or to the article describing Jmol <ref>PMID:21638687</ref> to the rescue.
== Structure ==
== Structure ==
<scene name='78/786627/5fgo_repeatiii/1'>PUR repeat III</scene> facilitates dimerization of Purα monomers. The association of two repeat III domains forms what is termed the "intermolecular domain".
<scene name='78/786627/5fgo_repeatiii/2'>PUR repeat III</scene> facilitates dimerization of Purα monomers. The association of two repeat III domains forms what is termed the "intermolecular domain".
== Function ==
== Function ==


<scene name='78/786627/5fgp_57and145/1'>Two aromatic residues</scene> have been implicated in the DNA unwinding activity of PurA.<ref>PMID:26744780</ref>  
<scene name='78/786627/5fgp_57and145/1'>Two aromatic residues</scene>, Y57 (repeat I) and F145 (repeat II) have been implicated in the DNA unwinding activity of PurA.<ref>PMID:26744780</ref>  


== Disease ==
== Disease ==

Revision as of 22:57, 27 April 2018

Purine-rich element binding protein alphaPurine-rich element binding protein alpha


Be careful with the < and > signs. You may include any references to papers as in: the use of JSmol in Proteopedia [1] or to the article describing Jmol [2] to the rescue.

Structure

facilitates dimerization of Purα monomers. The association of two repeat III domains forms what is termed the "intermolecular domain".

Function

, Y57 (repeat I) and F145 (repeat II) have been implicated in the DNA unwinding activity of PurA.[3]

Disease

Relevance

Structural highlights

This is a sample scene created with SAT to by Group, and another to make of the protein. You can make your own scenes on SAT starting from scratch or loading and editing one of these sample scenes.


PDB ID 5fgp

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ReferencesReferences

  1. Hanson, R. M., Prilusky, J., Renjian, Z., Nakane, T. and Sussman, J. L. (2013), JSmol and the Next-Generation Web-Based Representation of 3D Molecular Structure as Applied to Proteopedia. Isr. J. Chem., 53:207-216. doi:http://dx.doi.org/10.1002/ijch.201300024
  2. Herraez A. Biomolecules in the computer: Jmol to the rescue. Biochem Mol Biol Educ. 2006 Jul;34(4):255-61. doi: 10.1002/bmb.2006.494034042644. PMID:21638687 doi:10.1002/bmb.2006.494034042644
  3. Weber J, Bao H, Hartlmuller C, Wang Z, Windhager A, Janowski R, Madl T, Jin P, Niessing D. Structural basis of nucleic-acid recognition and double-strand unwinding by the essential neuronal protein Pur-alpha. Elife. 2016 Jan 8;5. pii: e11297. doi: 10.7554/eLife.11297. PMID:26744780 doi:http://dx.doi.org/10.7554/eLife.11297