1vpv: Difference between revisions

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==Crystal structure of a degv lipid binding protein (tm1468) from thermotoga maritima at 2.45 A resolution==
==Crystal structure of a degv lipid binding protein (tm1468) from thermotoga maritima at 2.45 A resolution==
<StructureSection load='1vpv' size='340' side='right' caption='[[1vpv]], [[Resolution|resolution]] 2.45&Aring;' scene=''>
<StructureSection load='1vpv' size='340' side='right'caption='[[1vpv]], [[Resolution|resolution]] 2.45&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[1vpv]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_43589 Atcc 43589]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VPV OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1VPV FirstGlance]. <br>
<table><tr><td colspan='2'>[[1vpv]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_43589 Atcc 43589]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VPV OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=1VPV FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PLM:PALMITIC+ACID'>PLM</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PLM:PALMITIC+ACID'>PLM</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">TM1468 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2336 ATCC 43589])</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">TM1468 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2336 ATCC 43589])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1vpv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vpv OCA], [http://pdbe.org/1vpv PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1vpv RCSB], [http://www.ebi.ac.uk/pdbsum/1vpv PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1vpv ProSAT], [http://www.topsan.org/Proteins/JCSG/1vpv TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=1vpv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vpv OCA], [http://pdbe.org/1vpv PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1vpv RCSB], [http://www.ebi.ac.uk/pdbsum/1vpv PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1vpv ProSAT], [http://www.topsan.org/Proteins/JCSG/1vpv TOPSAN]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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</StructureSection>
</StructureSection>
[[Category: Atcc 43589]]
[[Category: Atcc 43589]]
[[Category: Large Structures]]
[[Category: Structural genomic]]
[[Category: Structural genomic]]
[[Category: Dak1/degv-like fold]]
[[Category: Dak1/degv-like fold]]

Revision as of 10:40, 30 December 2020

Crystal structure of a degv lipid binding protein (tm1468) from thermotoga maritima at 2.45 A resolutionCrystal structure of a degv lipid binding protein (tm1468) from thermotoga maritima at 2.45 A resolution

Structural highlights

1vpv is a 2 chain structure with sequence from Atcc 43589. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:,
NonStd Res:
Gene:TM1468 (ATCC 43589)
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

[Y1468_THEMA] Binds long-chain fatty acids, such as palmitate, and may play a role in lipid transport or fatty acid metabolism.

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

1vpv, resolution 2.45Å

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