6b3u: Difference between revisions
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==Solution Structure of HIV-1 GP41 Transmembrane Domain in Bicelles== | ==Solution Structure of HIV-1 GP41 Transmembrane Domain in Bicelles== | ||
<StructureSection load='6b3u' size='340' side='right' caption='[[6b3u]], [[NMR_Ensembles_of_Models | 15 NMR models]]' scene=''> | <StructureSection load='6b3u' size='340' side='right'caption='[[6b3u]], [[NMR_Ensembles_of_Models | 15 NMR models]]' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[6b3u]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6B3U OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6B3U FirstGlance]. <br> | <table><tr><td colspan='2'>[[6b3u]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/9hiv1 9hiv1]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6B3U OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6B3U FirstGlance]. <br> | ||
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6b3u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6b3u OCA], [http://pdbe.org/6b3u PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6b3u RCSB], [http://www.ebi.ac.uk/pdbsum/6b3u PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6b3u ProSAT]</span></td></tr> | </td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">env ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=11676 9HIV1])</td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6b3u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6b3u OCA], [http://pdbe.org/6b3u PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6b3u RCSB], [http://www.ebi.ac.uk/pdbsum/6b3u PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6b3u ProSAT]</span></td></tr> | |||
</table> | </table> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
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</div> | </div> | ||
<div class="pdbe-citations 6b3u" style="background-color:#fffaf0;"></div> | <div class="pdbe-citations 6b3u" style="background-color:#fffaf0;"></div> | ||
==See Also== | |||
*[[Gp41 3D Structures|Gp41 3D Structures]] | |||
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Large Structures]] | |||
[[Category: Baber, J L]] | [[Category: Baber, J L]] | ||
[[Category: Bax, A]] | [[Category: Bax, A]] | ||
Revision as of 15:46, 25 December 2019
Solution Structure of HIV-1 GP41 Transmembrane Domain in BicellesSolution Structure of HIV-1 GP41 Transmembrane Domain in Bicelles
Structural highlights
Publication Abstract from PubMedCryo-electron microscopy and X-ray crystallography have shown that the pre- and postfusion states of the HIV-1 gp41 viral coat protein, although very different from one another, each adopt C3 symmetric structures. A stable homotrimeric structure for the transmembrane domain (TM) also was modeled and supported by experimental data. For a C3 symmetric structure, alignment in an anisotropic medium must be axially symmetric, with the unique axis of the alignment tensor coinciding with the C3 axis. However, NMR residual dipolar couplings (RDCs) measured under three different alignment conditions were found to be incompatible with C3 symmetry. Subsequent measurements by paramagnetic relaxation enhancement, analytical ultracentrifugation, and DEER EPR, indicate that the transmembrane domain is monomeric. (15)N NMR relaxation data and RDCs show that TM is highly ordered and uninterrupted for a total length of 32 residues, extending well into the membrane proximal external region. Tilted, Uninterrupted, Monomeric HIV-1 gp41 Transmembrane Helix from Residual Dipolar Couplings.,Chiliveri SC, Louis JM, Ghirlando R, Baber JL, Bax A J Am Chem Soc. 2018 Jan 10;140(1):34-37. doi: 10.1021/jacs.7b10245. Epub 2017 Dec, 27. PMID:29277995[1] From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine. See AlsoReferences
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