1h4u: Difference between revisions
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==Domain G2 of mouse nidogen-1== | ==Domain G2 of mouse nidogen-1== | ||
<StructureSection load='1h4u' size='340' side='right' caption='[[1h4u]], [[Resolution|resolution]] 2.20Å' scene=''> | <StructureSection load='1h4u' size='340' side='right'caption='[[1h4u]], [[Resolution|resolution]] 2.20Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[1h4u]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Lk3_transgenic_mice Lk3 transgenic mice]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1H4U OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1H4U FirstGlance]. <br> | <table><tr><td colspan='2'>[[1h4u]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Lk3_transgenic_mice Lk3 transgenic mice]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1H4U OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1H4U FirstGlance]. <br> | ||
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__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Large Structures]] | |||
[[Category: Lk3 transgenic mice]] | [[Category: Lk3 transgenic mice]] | ||
[[Category: Gohring, W]] | [[Category: Gohring, W]] |
Revision as of 12:01, 23 October 2019
Domain G2 of mouse nidogen-1Domain G2 of mouse nidogen-1
Structural highlights
Function[NID1_MOUSE] Sulfated glycoprotein widely distributed in basement membranes and tightly associated with laminin. Also binds to collagen IV and perlecan. It probably has a role in cell-extracellular matrix interactions. Evolutionary Conservation![]() Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf. Publication Abstract from PubMedNidogen, an invariant component of basement membranes, is a multifunctional protein that interacts with most other major basement membrane proteins. Here, we report the crystal structure of the mouse nidogen-1 G2 fragment, which contains binding sites for collagen IV and perlecan. The structure is composed of an EGF-like domain and an 11-stranded beta-barrel with a central helix. The beta-barrel domain has unexpected similarity to green fluorescent protein. A large surface patch on the beta-barrel is strikingly conserved in all metazoan nidogens. Site-directed mutagenesis demonstrates that the conserved residues are involved in perlecan binding. Crystal structure and mutational analysis of a perlecan-binding fragment of nidogen-1.,Hopf M, Gohring W, Ries A, Timpl R, Hohenester E Nat Struct Biol. 2001 Jul;8(7):634-40. PMID:11427896[1] From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine. References
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