2a89: Difference between revisions

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[[Image:2a89.gif|left|200px]]
[[Image:2a89.gif|left|200px]]


{{Structure
<!--
|PDB= 2a89 |SIZE=350|CAPTION= <scene name='initialview01'>2a89</scene>, resolution 1.85&Aring;
The line below this paragraph, containing "STRUCTURE_2a89", creates the "Structure Box" on the page.
|SITE=
You may change the PDB parameter (which sets the PDB file loaded into the applet)  
|LIGAND= <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=FCG:(N5,C4A)-(ALPHA-HYDROXY-PROPANO)-3,4,4A,5-TETRAHYDRO-FLAVIN-ADENINE+DINUCLEOTIDE'>FCG</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Sarcosine_oxidase Sarcosine oxidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.5.3.1 1.5.3.1] </span>
or leave the SCENE parameter empty for the default display.
|GENE= soxA, sox ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1409 Bacillus sp.])
-->
|DOMAIN=
{{STRUCTURE_2a89| PDB=2a89  | SCENE= }}  
|RELATEDENTRY=[[1l9f|1L9F]]
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2a89 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2a89 OCA], [http://www.ebi.ac.uk/pdbsum/2a89 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2a89 RCSB]</span>
}}


'''Monomeric Sarcosine Oxidase: Structure of a covalently flavinylated amine oxidizing enzyme'''
'''Monomeric Sarcosine Oxidase: Structure of a covalently flavinylated amine oxidizing enzyme'''
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[[Category: Mathews, F S.]]
[[Category: Mathews, F S.]]
[[Category: Zhao, G.]]
[[Category: Zhao, G.]]
[[Category: flavoprotein]]
[[Category: Flavoprotein]]
[[Category: oxidase]]
[[Category: Oxidase]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May  3 18:44:07 2008''
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 01:49:10 2008''

Revision as of 18:44, 3 May 2008

File:2a89.gif

Template:STRUCTURE 2a89

Monomeric Sarcosine Oxidase: Structure of a covalently flavinylated amine oxidizing enzyme


OverviewOverview

Monomeric sarcosine oxidase (MSOX) is a flavoprotein that contains covalently bound FAD [8a-(S-cysteinyl)FAD] and catalyzes the oxidation of sarcosine (N-methylglycine) and other secondary amino acids, such as l-proline. Our previous studies showed that N-(cyclopropyl)glycine (CPG) acts as a mechanism-based inactivator of MSOX [Zhao, G., et al. (2000) Biochemistry 39, 14341-14347]. The reaction results in the formation of a modified reduced flavin that can be further reduced and stabilized by treatment with sodium borohydride. The borohydride-reduced CPG-modified enzyme exhibits a mass increase of 63 +/- 2 Da as compared with native MSOX. The crystal structure of the modified enzyme, solved at 1.85 A resolution, shows that FAD is the only site of modification. The modified FAD contains a fused five-membered ring, linking the C(4a) and N(5) atoms of the flavin ring, with an additional oxygen atom bound to the carbon atom attached to N(5) and a tetrahedral carbon atom at flavin C(4) with a hydroxyl group attached to C(4). On the basis of the crystal structure of the borohydride-stabilized adduct, we conclude that the labile CPG-modified flavin is a 4a,5-dihydroflavin derivative with a substituent derived from the cleavage of the cyclopropyl ring in CPG. The results are consistent with CPG-mediated inactivation in a reaction initiated by single electron transfer from the amine function in CPG to FAD in MSOX, followed by collapse of the radical pair to yield a covalently modified 4a,5-dihydroflavin.

About this StructureAbout this Structure

2A89 is a Single protein structure of sequence from Bacillus sp.. Full crystallographic information is available from OCA.

ReferenceReference

Structure of the sodium borohydride-reduced N-(cyclopropyl)glycine adduct of the flavoenzyme monomeric sarcosine oxidase., Chen ZW, Zhao G, Martinovic S, Jorns MS, Mathews FS, Biochemistry. 2005 Nov 29;44(47):15444-50. PMID:16300392 Page seeded by OCA on Sat May 3 18:44:07 2008

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