1zop: Difference between revisions

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[[Image:1zop.jpg|left|200px]]
[[Image:1zop.jpg|left|200px]]


{{Structure
<!--
|PDB= 1zop |SIZE=350|CAPTION= <scene name='initialview01'>1zop</scene>, resolution 2.0&Aring;
The line below this paragraph, containing "STRUCTURE_1zop", creates the "Structure Box" on the page.
|SITE=
You may change the PDB parameter (which sets the PDB file loaded into the applet)  
|LIGAND= <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
|ACTIVITY=
or leave the SCENE parameter empty for the default display.
|GENE= PCR PRODUCT ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])
-->
|DOMAIN=
{{STRUCTURE_1zop| PDB=1zop |  SCENE= }}  
|RELATEDENTRY=
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1zop FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1zop OCA], [http://www.ebi.ac.uk/pdbsum/1zop PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1zop RCSB]</span>
}}


'''CD11A I-DOMAIN WITH BOUND MAGNESIUM ION'''
'''CD11A I-DOMAIN WITH BOUND MAGNESIUM ION'''
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[[Category: Leahy, D J.]]
[[Category: Leahy, D J.]]
[[Category: Qu, A.]]
[[Category: Qu, A.]]
[[Category: cell adhesion]]
[[Category: Cell adhesion]]
[[Category: cytoskeleton]]
[[Category: Cytoskeleton]]
[[Category: extracellular matrix]]
[[Category: Extracellular matrix]]
[[Category: glycoprotein]]
[[Category: Glycoprotein]]
[[Category: integrin]]
[[Category: Integrin]]
[[Category: signal]]
[[Category: Signal]]
[[Category: transmembrane]]
[[Category: Transmembrane]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May  3 17:53:14 2008''
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 01:39:38 2008''

Revision as of 17:53, 3 May 2008

File:1zop.jpg

Template:STRUCTURE 1zop

CD11A I-DOMAIN WITH BOUND MAGNESIUM ION


OverviewOverview

BACKGROUND: The integrin family of cell-surface receptors mediates a wide variety of cell-cell and cell-extracellular matrix interactions. Integrin-ligand interactions are invariably dependent on the presence of divalent cations, and a subset of integrins contain a approximately 200 amino acid inserted (I) domain that is important for ligand binding activity and contains a single divalent cation binding site. Many integrins are believed to respond to stimuli by undergoing a conformational change that increases their affinity for ligand, and there is a clear difference between two crystal structures of the CD11b I domain with different divalent cations (magnesium and manganese) bound. In addition to the different bound cation, a 'ligand mimetic' crystal lattice interaction in the CD11b I domain structure with bound magnesium has led to the interpretation that the different CD11b I domain structures represent different affinity states of I domains. The influence of the bound cation on I domain structure and function remains incompletely understood, however. The crystal structure of the CD11a I domain bound to manganese is known. We therefore set out to determine whether this structure changes when the metal ion is altered or removed. RESULTS: We report here the crystal structures of the CD11a I domain determined in the absence of bound metal ion and with bound magnesium ion. No major structural rearrangements are observed in the metal-binding site of the CD11a I domain in the absence or presence of bound manganese ion. The structures of the CD11a I domain with magnesium or manganese bound are extremely similar. CONCLUSIONS: The conformation of the CD11a I domain is not altered by changes in metal ion binding. The cation-dependence of ligand binding thus indicates that the metal ion is either involved in direct interaction with ligand or required to promote a favorable quaternary arrangement of the integrin.

About this StructureAbout this Structure

1ZOP is a Single protein structure of sequence from Homo sapiens. Full crystallographic information is available from OCA.

ReferenceReference

The role of the divalent cation in the structure of the I domain from the CD11a/CD18 integrin., Qu A, Leahy DJ, Structure. 1996 Aug 15;4(8):931-42. PMID:8805579 Page seeded by OCA on Sat May 3 17:53:14 2008

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