1vdc: Difference between revisions

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[[Image:1vdc.gif|left|200px]]
[[Image:1vdc.gif|left|200px]]


{{Structure
<!--
|PDB= 1vdc |SIZE=350|CAPTION= <scene name='initialview01'>1vdc</scene>, resolution 2.5&Aring;
The line below this paragraph, containing "STRUCTURE_1vdc", creates the "Structure Box" on the page.
|SITE= <scene name='pdbsite=ACT:Active+Site'>ACT</scene> and <scene name='pdbsite=FAD:Fad+Binding+Site'>FAD</scene>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
|LIGAND= <scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Thioredoxin-disulfide_reductase Thioredoxin-disulfide reductase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.8.1.9 1.8.1.9] </span>
or leave the SCENE parameter empty for the default display.
|GENE= ATTHIREDB ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=3702 Arabidopsis thaliana])
-->
|DOMAIN=
{{STRUCTURE_1vdc| PDB=1vdc  | SCENE= }}  
|RELATEDENTRY=
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1vdc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vdc OCA], [http://www.ebi.ac.uk/pdbsum/1vdc PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1vdc RCSB]</span>
}}


'''STRUCTURE OF NADPH DEPENDENT THIOREDOXIN REDUCTASE'''
'''STRUCTURE OF NADPH DEPENDENT THIOREDOXIN REDUCTASE'''
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[[Category: Dai, S.]]
[[Category: Dai, S.]]
[[Category: Eklund, H.]]
[[Category: Eklund, H.]]
[[Category: disulfide oxidoreductase]]
[[Category: Disulfide oxidoreductase]]
[[Category: flavin adenine dinuleotide]]
[[Category: Flavin adenine dinuleotide]]
[[Category: hypothetical protein]]
[[Category: Hypothetical protein]]
[[Category: oxidoreductase]]
[[Category: Oxidoreductase]]
[[Category: redox-active center]]
[[Category: Redox-active center]]
[[Category: thioredoxin reductase]]
[[Category: Thioredoxin reductase]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May  3 12:24:16 2008''
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 00:22:49 2008''

Revision as of 12:24, 3 May 2008

File:1vdc.gif

Template:STRUCTURE 1vdc

STRUCTURE OF NADPH DEPENDENT THIOREDOXIN REDUCTASE


OverviewOverview

Thioredoxin exists in all organisms and is responsible for the hydrogen transfer to important enzymes for ribonucleotide reduction and the reduction of methionine sulphoxide and sulphate. Thioredoxins have also been shown to regulate enzyme activity in plants and are also involved in the regulation of transcription factors and several other regulatory activities. Thioredoxin is reduced by the flavoenzyme thioredoxin reductase using NADPH. We have now determined the first structure of a eukaryotic thioredoxin reductase, from the plant Arabidopsis thaliana, at 2.5 A resolution. The dimeric A. thaliana thioredoxin reductase is structurally similar to that of the Escherichia coli enzyme, and most differences occur in the loops. Because the plant and E. coli enzymes have the same architecture, with the same dimeric structure and the same position of the redox active disulphide bond, a similar mechanism that involves very large domain rotations is likely for the two enzymes. The subunit is divided into two domains, one that binds FAD and one that binds NADPH. The relative positions of the domains in A. thaliana thioredoxin reductase differ from those of the E. coli reductase. When the FAD domains are superimposed, the NADPH domain of A. thaliana thioredoxin reductase must be rotated by 8 degrees to superimpose on the corresponding domain of the E. coli enzyme. The domain rotation we now observe is much smaller than necessary for the thioredoxin reduction cycle.

About this StructureAbout this Structure

1VDC is a Single protein structure of sequence from Arabidopsis thaliana. Full crystallographic information is available from OCA.

ReferenceReference

Crystal structure of Arabidopsis thaliana NADPH dependent thioredoxin reductase at 2.5 A resolution., Dai S, Saarinen M, Ramaswamy S, Meyer Y, Jacquot JP, Eklund H, J Mol Biol. 1996 Dec 20;264(5):1044-57. PMID:9000629 Page seeded by OCA on Sat May 3 12:24:16 2008

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