Sandbox Reserved 1069: Difference between revisions
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'''Binding Site C''' | '''Binding Site C''' | ||
<scene name='69/694236/Bsc/1'>Binding site C</scene> has vastly opposite properties from what is seen in binding site A. It is located on a random coil between the two C-terminus domain interfaces. Here, there is a binuclear coordination of Zn<sup>2+</sup> between the Asp285 residue that <scene name='69/694236/Bsc/2'>bridges</scene> the Zn<sup>2+</sup> ions together and the four <scene name='69/694236/Bsc/3'>coordinating</scene> residues (His232, His248, His283, His161). The Asp285 residue does not have outer shell constraints, however, the same cannot be said for the four histidine residues. These constraints consist of hydrogen bonds to the residues surrounding the binding site allowing bidentate bond formation, or hydrogen bonding to a metal in two places. Formation of bidentate bonds creates an extensive network of interactions at the CTD interface, which allow for stability and strengthening of the CTD-CTD association. | <scene name='69/694236/Bsc/1'>Binding site C</scene> has vastly opposite properties from what is seen in binding site A. It is located on a random coil between the two C-terminus domain interfaces. Here, there is a binuclear coordination of Zn<sup>2+</sup> between the Asp285 residue that <scene name='69/694236/Bsc/2'>bridges</scene> the Zn<sup>2+</sup> ions together and the four <scene name='69/694236/Bsc/3'>coordinating</scene> residues (His232, His248, His283, His161). The Asp285 residue does not have outer shell constraints, however, the same cannot be said for the four histidine residues. These constraints consist of hydrogen bonds to the residues surrounding the binding site allowing bidentate bond formation, or hydrogen bonding to a metal in two places.A couple of these potential hydrogen bonds are shown are shown <scene name='69/694236/Bsc/4'> here </scene> Formation of bidentate bonds creates an extensive network of interactions at the CTD interface, which allow for stability and strengthening of the CTD-CTD association. | ||
==Mechanism of Transport== | ==Mechanism of Transport== |