5t10: Difference between revisions

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==PelC dodecamer from Paraburkholderia phytofirmans, space group P6==
==PelC dodecamer from Paraburkholderia phytofirmans, space group P6==
<StructureSection load='5t10' size='340' side='right' caption='[[5t10]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
<StructureSection load='5t10' size='340' side='right'caption='[[5t10]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[5t10]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5T10 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5T10 FirstGlance]. <br>
<table><tr><td colspan='2'>[[5t10]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Burkholderia_phytofirmans Burkholderia phytofirmans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5T10 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5T10 FirstGlance]. <br>
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5t10 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5t10 OCA], [http://pdbe.org/5t10 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5t10 RCSB], [http://www.ebi.ac.uk/pdbsum/5t10 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5t10 ProSAT]</span></td></tr>
</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Bphyt_1493 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=398527 Burkholderia phytofirmans])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5t10 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5t10 OCA], [http://pdbe.org/5t10 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5t10 RCSB], [http://www.ebi.ac.uk/pdbsum/5t10 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5t10 ProSAT]</span></td></tr>
</table>
</table>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Burkholderia phytofirmans]]
[[Category: Large Structures]]
[[Category: Howell, P L]]
[[Category: Howell, P L]]
[[Category: Marmont, L S]]
[[Category: Marmont, L S]]

Revision as of 14:16, 16 September 2020

PelC dodecamer from Paraburkholderia phytofirmans, space group P6PelC dodecamer from Paraburkholderia phytofirmans, space group P6

Structural highlights

5t10 is a 4 chain structure with sequence from Burkholderia phytofirmans. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Gene:Bphyt_1493 (Burkholderia phytofirmans)
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Publication Abstract from PubMed

Secreted polysaccharides are important functional and structural components of bacterial biofilms. The opportunistic pathogen Pseudomonas aeruginosa produces the cationic exopolysaccharide Pel, which protects bacteria from aminoglycoside antibiotics and contributes to biofilm architecture through ionic interactions with extracellular DNA. A bioinformatics analysis of genome databases suggests that gene clusters for Pel biosynthesis are present in >125 bacterial species, yet little is known about how this biofilm exopolysaccharide is synthesized and exported from the cell. In this work, we characterize PelC, an outer membrane lipoprotein essential for Pel production. Crystal structures of PelC from Geobacter metallireducens and Paraburkholderia phytofirmans coupled with structure-guided disulfide cross-linking in P. aeruginosa suggest that PelC assembles into a 12- subunit ring-shaped oligomer. In this arrangement, an aromatic belt in proximity to its lipidation site positions the highly electronegative surface of PelC toward the periplasm. PelC is structurally similar to the Escherichia coli amyloid exporter CsgG; however, unlike CsgG, PelC does not possess membrane-spanning segments required for polymer export across the outer membrane. We show that the multidomain protein PelB with a predicted C-terminal beta-barrel porin localizes to the outer membrane, and propose that PelC functions as an electronegative funnel to guide the positively charged Pel polysaccharide toward an exit channel formed by PelB. Together, our findings provide insight into the unique molecular architecture and export mechanism of the Pel apparatus, a widespread exopolysaccharide secretion system found in environmental and pathogenic bacteria.

Oligomeric lipoprotein PelC guides Pel polysaccharide export across the outer membrane of Pseudomonas aeruginosa.,Marmont LS, Rich JD, Whitney JC, Whitfield GB, Almblad H, Robinson H, Parsek MR, Harrison JJ, Howell PL Proc Natl Acad Sci U S A. 2017 Feb 27. pii: 201613606. doi:, 10.1073/pnas.1613606114. PMID:28242707[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

  1. Marmont LS, Rich JD, Whitney JC, Whitfield GB, Almblad H, Robinson H, Parsek MR, Harrison JJ, Howell PL. Oligomeric lipoprotein PelC guides Pel polysaccharide export across the outer membrane of Pseudomonas aeruginosa. Proc Natl Acad Sci U S A. 2017 Feb 27. pii: 201613606. doi:, 10.1073/pnas.1613606114. PMID:28242707 doi:http://dx.doi.org/10.1073/pnas.1613606114

5t10, resolution 2.50Å

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