1s6v: Difference between revisions

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[[Image:1s6v.jpg|left|200px]]
[[Image:1s6v.jpg|left|200px]]


{{Structure
<!--
|PDB= 1s6v |SIZE=350|CAPTION= <scene name='initialview01'>1s6v</scene>, resolution 1.88&Aring;
The line below this paragraph, containing "STRUCTURE_1s6v", creates the "Structure Box" on the page.
|SITE=
You may change the PDB parameter (which sets the PDB file loaded into the applet)
|LIGAND= <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=IOD:IODIDE+ION'>IOD</scene>
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Cytochrome-c_peroxidase Cytochrome-c peroxidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.11.1.5 1.11.1.5] </span>
or leave the SCENE parameter empty for the default display.
|GENE= CCP1, CCP, CPO, YKR066C ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=4932 Saccharomyces cerevisiae])
-->
|DOMAIN=
{{STRUCTURE_1s6v| PDB=1s6v  | SCENE= }}  
|RELATEDENTRY=[[2pcc|2PCC]]
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1s6v FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1s6v OCA], [http://www.ebi.ac.uk/pdbsum/1s6v PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1s6v RCSB]</span>
}}


'''Structure of a cytochrome c peroxidase-cytochrome c site specific cross-link'''
'''Structure of a cytochrome c peroxidase-cytochrome c site specific cross-link'''
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[[Category: Li, H.]]
[[Category: Li, H.]]
[[Category: Poulos, T L.]]
[[Category: Poulos, T L.]]
[[Category: electron transfer]]
[[Category: Electron transfer]]
[[Category: heme enzyme]]
[[Category: Heme enzyme]]
[[Category: oxidoreductase]]
[[Category: Oxidoreductase]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May  3 08:22:19 2008''
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 23:38:12 2008''

Revision as of 08:22, 3 May 2008

File:1s6v.jpg

Template:STRUCTURE 1s6v

Structure of a cytochrome c peroxidase-cytochrome c site specific cross-link


OverviewOverview

A specific covalently cross-linked complex between redox partners yeast cytochrome c peroxidase (CCP) and cytochrome c (cyt. c) has been made by engineering cysteines into CCP and cyt. c that form an intermolecular disulfide bond in high yield. The crystal structure of the cross-linked complex has been solved to 1.88-A resolution and closely resembles the structure of the noncovalent complex [Pellitier, H. & Kraut, J. (1992) Science 258, 1748-1755]. The higher resolution of the covalent complex has enabled the location of ordered water molecules at the peroxidase-cytochrome c interface that serve to bridge between the two proteins by hydrogen bonding. As in the noncovalent complex, direct electrostatic interactions between protein groups appear not to be critical in complex formation. UV-visible spectroscopic and stopped-flow studies indicate that CCP in the covalent complex reacts normally with H(2)O(2) to give compound I. Stopped-flow kinetic studies also show that intramolecular electron transfer between the cross-linked ferrocytochrome c and the Trp-191 cation radical site in CCP compound I occurs fast and is nearly complete within the dead time ( approximately 2 ms) of the instrument. These results indicate that the structure of the covalent complex closely mimics the physiological electron transfer complex. In addition, single-turnover and steady-state experiments reveal that CCP compound I in the covalent complex oxidizes exogenously added ferrocytochrome c at a slow rate (t(1/2) approximately 2 min), indicating that CCP does not have a second independent site for physiologically relevant electron transfer.

About this StructureAbout this Structure

1S6V is a Protein complex structure of sequences from Saccharomyces cerevisiae. Full crystallographic information is available from OCA.

ReferenceReference

Crystal structure and characterization of a cytochrome c peroxidase-cytochrome c site-specific cross-link., Guo M, Bhaskar B, Li H, Barrows TP, Poulos TL, Proc Natl Acad Sci U S A. 2004 Apr 20;101(16):5940-5. Epub 2004 Apr 7. PMID:15071191 Page seeded by OCA on Sat May 3 08:22:19 2008

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