4hcd: Difference between revisions

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==Crystal structure of D-glucarate dehydratase from agrobacterium tumefaciens complexed with magnesium==
==Crystal structure of D-glucarate dehydratase from agrobacterium tumefaciens complexed with magnesium==
<StructureSection load='4hcd' size='340' side='right' caption='[[4hcd]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
<StructureSection load='4hcd' size='340' side='right'caption='[[4hcd]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[4hcd]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Agrt5 Agrt5]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4HCD OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4HCD FirstGlance]. <br>
<table><tr><td colspan='2'>[[4hcd]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrobacterium_fabrum_str._C58 Agrobacterium fabrum str. C58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4HCD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4HCD FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4hcd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4hcd OCA], [https://pdbe.org/4hcd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4hcd RCSB], [https://www.ebi.ac.uk/pdbsum/4hcd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4hcd ProSAT]</span></td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1rvk|1rvk]], [[4hch|4hch]], [[4hcl|4hcl]], [[4hcm|4hcm]]</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Atu3453 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=176299 AGRT5])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4hcd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4hcd OCA], [http://pdbe.org/4hcd PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4hcd RCSB], [http://www.ebi.ac.uk/pdbsum/4hcd PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4hcd ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q7CSI0_AGRFC Q7CSI0_AGRFC]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Agrt5]]
[[Category: Agrobacterium fabrum str. C58]]
[[Category: Almo, S C]]
[[Category: Large Structures]]
[[Category: Fedorov, A A]]
[[Category: Almo SC]]
[[Category: Fedorov, E V]]
[[Category: Fedorov AA]]
[[Category: Gerlt, J A]]
[[Category: Fedorov EV]]
[[Category: Millikin, C]]
[[Category: Gerlt JA]]
[[Category: Sakai, A]]
[[Category: Millikin C]]
[[Category: D-glucarate]]
[[Category: Sakai A]]
[[Category: D-glucarate dehydratase]]
[[Category: Enolase fold]]
[[Category: Isomerase]]

Revision as of 11:10, 3 November 2022

Crystal structure of D-glucarate dehydratase from agrobacterium tumefaciens complexed with magnesiumCrystal structure of D-glucarate dehydratase from agrobacterium tumefaciens complexed with magnesium

Structural highlights

4hcd is a 1 chain structure with sequence from Agrobacterium fabrum str. C58. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:, , ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

Q7CSI0_AGRFC

4hcd, resolution 1.70Å

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OCA