3qw1: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
← Older editNewer edit →
No edit summary
No edit summary
Line 1: Line 1:


==Crystal structure of the Zn-RIDC1 complex stabilized by BMH crosslinks==
==Crystal structure of the Zn-RIDC1 complex stabilized by BMH crosslinks==
<StructureSection load='3qw1' size='340' side='right' caption='[[3qw1]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
<StructureSection load='3qw1' size='340' side='right'caption='[[3qw1]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3qw1]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_coli"_migula_1895 "bacillus coli" migula 1895]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3QW1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3QW1 FirstGlance]. <br>
<table><tr><td colspan='2'>[[3qw1]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/"bacillus_coli"_migula_1895 "bacillus coli" migula 1895]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3QW1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3QW1 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=LCY:1-METHYLPYRROLIDINE-2,5-DIONE'>LCY</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=LCY:1-METHYLPYRROLIDINE-2,5-DIONE'>LCY</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3qvy|3qvy]], [[3qvz|3qvz]], [[3qw0|3qw0]], [[3hni|3hni]], [[3iq6|3iq6]]</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3qvy|3qvy]], [[3qvz|3qvz]], [[3qw0|3qw0]], [[3hni|3hni]], [[3iq6|3iq6]]</div></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3qw1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3qw1 OCA], [http://pdbe.org/3qw1 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3qw1 RCSB], [http://www.ebi.ac.uk/pdbsum/3qw1 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3qw1 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3qw1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3qw1 OCA], [https://pdbe.org/3qw1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3qw1 RCSB], [https://www.ebi.ac.uk/pdbsum/3qw1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3qw1 ProSAT]</span></td></tr>
</table>
</table>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
Line 19: Line 19:


==See Also==
==See Also==
*[[Cytochrome c|Cytochrome c]]
*[[Cytochrome C 3D structures|Cytochrome C 3D structures]]
== References ==
== References ==
<references/>
<references/>
Line 25: Line 25:
</StructureSection>
</StructureSection>
[[Category: Bacillus coli migula 1895]]
[[Category: Bacillus coli migula 1895]]
[[Category: Large Structures]]
[[Category: Salgado, E N]]
[[Category: Salgado, E N]]
[[Category: Tezcan, F A]]
[[Category: Tezcan, F A]]
[[Category: Four-helix bundle]]
[[Category: Four-helix bundle]]
[[Category: Oxidoreductase]]
[[Category: Oxidoreductase]]

Revision as of 08:38, 15 June 2022

Crystal structure of the Zn-RIDC1 complex stabilized by BMH crosslinksCrystal structure of the Zn-RIDC1 complex stabilized by BMH crosslinks

Structural highlights

3qw1 is a 4 chain structure with sequence from "bacillus_coli"_migula_1895 "bacillus coli" migula 1895. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:, ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Publication Abstract from PubMed

Here, we report that the approach of metal-templated ligand synthesis can be applied to construct a dimeric protein assembly ((BMOE)RIDC1(2)), which is stabilized by noncovalent interactions and flexible covalent cross-linkers around the Zn templates. Despite its flexibility, (BMOE)RIDC1(2) selectively binds Zn(II) over other divalent metals and undergoes dimerization upon metal binding. Such simultaneous fulfillment of plasticity and selectivity is a hallmark of cellular signaling events that involve ligand/metal-induced protein dimerization.

Templated Construction of a Zn-Selective Protein Dimerization Motif.,Salgado EN, Brodin JD, To MM, Tezcan FA Inorg Chem. 2011 Jun 7. PMID:21648390[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

See Also

References

  1. ↑ Salgado EN, Brodin JD, To MM, Tezcan FA. Templated Construction of a Zn-Selective Protein Dimerization Motif. Inorg Chem. 2011 Jun 7. PMID:21648390 doi:10.1021/ic200746m

3qw1, resolution 2.70Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
Retrieved from "https://proteopedia.openfox.io/wiki/index.php?title=3qw1&oldid=3573156"