1q7l: Difference between revisions

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[[Image:1q7l.gif|left|200px]]
[[Image:1q7l.gif|left|200px]]


{{Structure
<!--
|PDB= 1q7l |SIZE=350|CAPTION= <scene name='initialview01'>1q7l</scene>, resolution 1.40&Aring;
The line below this paragraph, containing "STRUCTURE_1q7l", creates the "Structure Box" on the page.
|SITE=
You may change the PDB parameter (which sets the PDB file loaded into the applet)
|LIGAND= <scene name='pdbligand=GLY:GLYCINE'>GLY</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Aminoacylase Aminoacylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.1.14 3.5.1.14] </span>
or leave the SCENE parameter empty for the default display.
|GENE= ACY1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])
-->
|DOMAIN=
{{STRUCTURE_1q7l| PDB=1q7l  | SCENE= }}  
|RELATEDENTRY=
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1q7l FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1q7l OCA], [http://www.ebi.ac.uk/pdbsum/1q7l PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1q7l RCSB]</span>
}}


'''Zn-binding domain of the T347G mutant of human aminoacylase-I'''
'''Zn-binding domain of the T347G mutant of human aminoacylase-I'''
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[[Category: Lunin, V V.]]
[[Category: Lunin, V V.]]
[[Category: Menard, R.]]
[[Category: Menard, R.]]
[[Category: aminoacylase-1]]
[[Category: Aminoacylase-1]]
[[Category: catalysis]]
[[Category: Catalysis]]
[[Category: enzyme dimerization]]
[[Category: Enzyme dimerization]]
[[Category: site-directed mutagenesis]]
[[Category: Site-directed mutagenesis]]
[[Category: structure comparison]]
[[Category: Structure comparison]]
[[Category: zinc]]
[[Category: Zinc]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May  3 05:58:09 2008''
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 23:09:53 2008''

Revision as of 05:58, 3 May 2008

File:1q7l.gif

Template:STRUCTURE 1q7l

Zn-binding domain of the T347G mutant of human aminoacylase-I


OverviewOverview

Members of the aminoacylase-1 (Acy1)/M20 family of aminoacylases and exopeptidases exist as either monomers or homodimers. They contain a zinc-binding domain and a second domain mediating dimerization in the latter case. The roles that both domains play in catalysis have been investigated for human Acy1 (hAcy1) by x-ray crystallography and by site-directed mutagenesis. Structure comparison of the dinuclear zinc center in a mutant of hAcy1 reported here with dizinc centers in related enzymes points to a difference in zinc ligation in the Acy1/M20 family. Mutational analysis supports catalytic roles of zinc ions, a vicinal glutamate, and a histidine from the dimerization domain. By complementing different active site mutants of hAcy1, we show that catalysis occurs at the dimer interface. Reinterpretation of the structure of a monomeric homolog, peptidase V, reveals that a domain insertion mimics dimerization. We conclude that monomeric and dimeric Acy1/M20 family members share a unique active site architecture involving both enzyme domains. The study may provide means to improve homologous carboxypeptidase G2 toward application in antibody-directed enzyme prodrug therapy.

DiseaseDisease

Known disease associated with this structure: Aminoacylase 1 deficiency OMIM:[104620]

About this StructureAbout this Structure

1Q7L is a Protein complex structure of sequences from Homo sapiens. Full crystallographic information is available from OCA.

ReferenceReference

Essential roles of zinc ligation and enzyme dimerization for catalysis in the aminoacylase-1/M20 family., Lindner HA, Lunin VV, Alary A, Hecker R, Cygler M, Menard R, J Biol Chem. 2003 Nov 7;278(45):44496-504. Epub 2003 Aug 21. PMID:12933810 Page seeded by OCA on Sat May 3 05:58:09 2008

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