3v88: Difference between revisions

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==Thaumatin by Classical Hanging Drop Vapour Diffusion after 18.1 MGy X-Ray dose at ESRF ID29 beamline (Best Case)==
==Thaumatin by Classical Hanging Drop Vapour Diffusion after 18.1 MGy X-Ray dose at ESRF ID29 beamline (Best Case)==
<StructureSection load='3v88' size='340' side='right' caption='[[3v88]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
<StructureSection load='3v88' size='340' side='right'caption='[[3v88]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3v88]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Thaumatococcus_daniellii Thaumatococcus daniellii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3V88 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3V88 FirstGlance]. <br>
<table><tr><td colspan='2'>[[3v88]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thaumatococcus_daniellii Thaumatococcus daniellii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3V88 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3V88 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3v7v|3v7v]], [[3v82|3v82]], [[3v84|3v84]], [[3v87|3v87]], [[3v8a|3v8a]], [[3vce|3vce]], [[3vcg|3vcg]], [[3vch|3vch]], [[3vci|3vci]], [[3vcj|3vcj]], [[3vck|3vck]], [[3ald|3ald]]</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3v7v|3v7v]], [[3v82|3v82]], [[3v84|3v84]], [[3v87|3v87]], [[3v8a|3v8a]], [[3vce|3vce]], [[3vcg|3vcg]], [[3vch|3vch]], [[3vci|3vci]], [[3vcj|3vcj]], [[3vck|3vck]], [[3ald|3ald]]</div></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3v88 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3v88 OCA], [http://pdbe.org/3v88 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3v88 RCSB], [http://www.ebi.ac.uk/pdbsum/3v88 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3v88 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3v88 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3v88 OCA], [https://pdbe.org/3v88 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3v88 RCSB], [https://www.ebi.ac.uk/pdbsum/3v88 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3v88 ProSAT]</span></td></tr>
</table>
</table>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Thaumatococcus daniellii]]
[[Category: Thaumatococcus daniellii]]
[[Category: Belmonte, L]]
[[Category: Belmonte, L]]

Revision as of 11:39, 20 July 2022

Thaumatin by Classical Hanging Drop Vapour Diffusion after 18.1 MGy X-Ray dose at ESRF ID29 beamline (Best Case)Thaumatin by Classical Hanging Drop Vapour Diffusion after 18.1 MGy X-Ray dose at ESRF ID29 beamline (Best Case)

Structural highlights

3v88 is a 1 chain structure with sequence from Thaumatococcus daniellii. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Publication Abstract from PubMed

A state-of-the-art review of the role of the Langmuir-Blodgett nanotemplate on protein crystal structures is here presented. Crystals grown by nanostructured template appear more radiation resistant than the classical ones, even in the presence of a third-generation highly focused beam at the European Synchrotron Radiation Facility. The electron density maps and the changes in parameters such as total diffractive power, B-factor, and pairwise R-factor have been discussed. Protein crystals, grown by the Langmuir-Blodgett nanotemplate-based method, proved to be more radiation resistant compared to crystals grown by the classical hanging drop method in terms of both global and specific damage.

Langmuir-blodgett nanotemplate and radiation resistance in protein crystals: state of the art.,Belmonte L, Pechkova E, Tripathi S, Scudieri D, Nicolini C Crit Rev Eukaryot Gene Expr. 2012;22(3):219-32. PMID:23140163[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

  1. Belmonte L, Pechkova E, Tripathi S, Scudieri D, Nicolini C. Langmuir-blodgett nanotemplate and radiation resistance in protein crystals: state of the art. Crit Rev Eukaryot Gene Expr. 2012;22(3):219-32. PMID:23140163

3v88, resolution 2.30Å

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OCA