4irp: Difference between revisions

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 ==Crystal structure of catalytic domain of human beta1,4-galactosyltransferase-7 in open conformation with manganses and UDP==
-<StructureSection load='4irp' size='340' side='right' caption='[[4irp]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
+<StructureSection load='4irp' size='340' side='right'caption='[[4irp]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[4irp]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4IRP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4IRP FirstGlance]. <br>
+<table><tr><td colspan='2'>[[4irp]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4IRP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4IRP FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=IMD:IMIDAZOLE'>IMD</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=UDP:URIDINE-5-DIPHOSPHATE'>UDP</scene></td></tr>
+</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=IMD:IMIDAZOLE'>IMD</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=UDP:URIDINE-5-DIPHOSPHATE'>UDP</scene></td></tr>
-<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4irq|4irq]]</td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4irp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4irp OCA], [https://pdbe.org/4irp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4irp RCSB], [https://www.ebi.ac.uk/pdbsum/4irp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4irp ProSAT]</span></td></tr>
-<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">4galactosyltransferase, B4GALT7, beta1, UNQ748/PRO1478, XGALT1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4irp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4irp OCA], [http://pdbe.org/4irp PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4irp RCSB], [http://www.ebi.ac.uk/pdbsum/4irp PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4irp ProSAT]</span></td></tr>
 </table>
 == Disease ==
-[[http://www.uniprot.org/uniprot/B4GT7_HUMAN B4GT7_HUMAN]] Ehlers-Danlos syndrome, progeroid type. The disease is caused by mutations affecting the gene represented in this entry.
+[https://www.uniprot.org/uniprot/B4GT7_HUMAN B4GT7_HUMAN] Ehlers-Danlos syndrome, progeroid type. The disease is caused by mutations affecting the gene represented in this entry.
 == Function ==
-[[http://www.uniprot.org/uniprot/B4GT7_HUMAN B4GT7_HUMAN]] Required for the biosynthesis of the tetrasaccharide linkage region of proteoglycans, especially for small proteoglycans in skin fibroblasts.
+[https://www.uniprot.org/uniprot/B4GT7_HUMAN B4GT7_HUMAN] Required for the biosynthesis of the tetrasaccharide linkage region of proteoglycans, especially for small proteoglycans in skin fibroblasts.
 <div style="background-color:#fffaf0;">
 == Publication Abstract from PubMed ==
@@ Line 22: / Line 20: @@
 </div>
 <div class="pdbe-citations 4irp" style="background-color:#fffaf0;"></div>
+==See Also==
+*[[Glycosyltransferase 3D structures|Glycosyltransferase 3D structures]]
 == References ==
 <references/>
 __TOC__
 </StructureSection>
-[[Category: Human]]
+[[Category: Homo sapiens]]
-[[Category: Qasba, P K]]
+[[Category: Large Structures]]
-[[Category: Ramakrishnan, B]]
+[[Category: Qasba PK]]
-[[Category: Tsutsui, Y]]
+[[Category: Ramakrishnan B]]
-[[Category: Glycosyltransferase]]
+[[Category: Tsutsui Y]]
-[[Category: Golgi]]
-[[Category: Gt-a fold]]
-[[Category: Manganese and udp complex]]
-[[Category: Open conformation]]
-[[Category: Transferase]]