1nph: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
No edit summary
No edit summary
Line 1: Line 1:
[[Image:1nph.jpg|left|200px]]
[[Image:1nph.jpg|left|200px]]


{{Structure
<!--
|PDB= 1nph |SIZE=350|CAPTION= <scene name='initialview01'>1nph</scene>, resolution 3.&Aring;
The line below this paragraph, containing "STRUCTURE_1nph", creates the "Structure Box" on the page.
|SITE=
You may change the PDB parameter (which sets the PDB file loaded into the applet)
|LIGAND= <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
|ACTIVITY=
or leave the SCENE parameter empty for the default display.
|GENE= GSN OR GSB ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 Mus musculus])
-->
|DOMAIN=
{{STRUCTURE_1nph| PDB=1nph  | SCENE= }}  
|RELATEDENTRY=
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1nph FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1nph OCA], [http://www.ebi.ac.uk/pdbsum/1nph PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1nph RCSB]</span>
}}


'''Gelsolin Domains 4-6 in Active, Actin Free Conformation Identifies Sites of Regulatory Calcium Ions'''
'''Gelsolin Domains 4-6 in Active, Actin Free Conformation Identifies Sites of Regulatory Calcium Ions'''
Line 29: Line 26:
[[Category: McLaughlin, P J.]]
[[Category: McLaughlin, P J.]]
[[Category: Weeds, A G.]]
[[Category: Weeds, A G.]]
[[Category: beta sheet]]
[[Category: Beta sheet]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May  3 02:49:12 2008''
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 22:33:39 2008''

Revision as of 02:49, 3 May 2008

File:1nph.jpg

Template:STRUCTURE 1nph

Gelsolin Domains 4-6 in Active, Actin Free Conformation Identifies Sites of Regulatory Calcium Ions


OverviewOverview

Structural analysis of gelsolin domains 4-6 demonstrates that the two highest-affinity calcium ions that activate the molecule are in domains 5 and 6, one in each. An additional calcium site in domain 4 depends on subsequent actin binding and is seen only in the complex. The uncomplexed structure is primed to bind actin. Since the disposition of the three domains is similar in different crystal environments, either free or in complex with actin, the conformation in calcium is intrinsic to active gelsolin itself. Thus the actin-free structure shows that the structure with an actin monomer is a good model for an actin filament cap. The last 13 residues of domain 6 have been proposed to be a calcium-activated latch that, in the inhibited form only, links two halves of gelsolin. Comparison with the active structure shows that loosening of the latch contributes but is not central to activation. Calcium binding in domain 6 invokes a cascade of swapped ion-pairs. A basic residue swaps acidic binding partners to stabilise a straightened form of a helix that is kinked in inhibited gelsolin. The other end of the helix is connected by a loop to an edge beta-strand. In active gelsolin, an acidic residue in this helix breaks with its loop partner to form a new intrahelical ion-pairing, resulting in the breakage of the continuous sheet between domains 4 and 6, which is central to the inhibited conformation. A structural alignment of domain sequences provides a rationale to understand why the two calcium sites found here have the highest affinity amongst the five different candidate sites found in other gelsolin structures.

About this StructureAbout this Structure

1NPH is a Single protein structure of sequence from Mus musculus. Full crystallographic information is available from OCA.

ReferenceReference

Gelsolin domains 4-6 in active, actin-free conformation identifies sites of regulatory calcium ions., Kolappan S, Gooch JT, Weeds AG, McLaughlin PJ, J Mol Biol. 2003 May 23;329(1):85-92. PMID:12742020 Page seeded by OCA on Sat May 3 02:49:12 2008

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA