3gp4: Difference between revisions

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Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

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 ==Crystal structure of putative MerR family transcriptional regulator from listeria monocytogenes==
-<StructureSection load='3gp4' size='340' side='right' caption='[[3gp4]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
+<StructureSection load='3gp4' size='340' side='right'caption='[[3gp4]]' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[3gp4]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Lismf Lismf]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GP4 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3GP4 FirstGlance]. <br>
+<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GP4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GP4 FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MED:D-METHIONINE'>MED</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
+</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3gp4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gp4 OCA], [https://pdbe.org/3gp4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3gp4 RCSB], [https://www.ebi.ac.uk/pdbsum/3gp4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3gp4 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3gp4 TOPSAN]</span></td></tr>
-<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">LMOf2365_2715 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=265669 LISMF])</td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3gp4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gp4 OCA], [http://pdbe.org/3gp4 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3gp4 RCSB], [http://www.ebi.ac.uk/pdbsum/3gp4 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3gp4 ProSAT], [http://www.topsan.org/Proteins/NYSGXRC/3gp4 TOPSAN]</span></td></tr>
 </table>
 == Evolutionary Conservation ==
@@ Line 12: / Line 10: @@
 Check<jmol>
    <jmolCheckbox>
-     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gp/3gp4_consurf.spt"</scriptWhenChecked>
+     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gp/3gp4_consurf.spt"</scriptWhenChecked>
      <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
      <text>to colour the structure by Evolutionary Conservation</text>
@@ Line 20: / Line 18: @@
 __TOC__
 </StructureSection>
-[[Category: Lismf]]
+[[Category: Large Structures]]
-[[Category: Almo, S C]]
+[[Category: Almo SC]]
-[[Category: Burley, S K]]
+[[Category: Burley SK]]
-[[Category: Morano, C]]
+[[Category: Morano C]]
-[[Category: Structural genomic]]
+[[Category: Ramagopal UA]]
-[[Category: Ramagopal, U A]]
+[[Category: Toro R]]
-[[Category: Toro, R]]
-[[Category: Dna-binding]]
-[[Category: Merr]]
-[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]]
-[[Category: PSI, Protein structure initiative]]
-[[Category: Transcription regulator]]
-[[Category: Transcriptional regulator]]