3ne2: Difference between revisions

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==Archaeoglobus fulgidus aquaporin==
==Archaeoglobus fulgidus aquaporin==
<StructureSection load='3ne2' size='340' side='right' caption='[[3ne2]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
<StructureSection load='3ne2' size='340' side='right'caption='[[3ne2]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3ne2]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Arcfl Arcfl]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NE2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3NE2 FirstGlance]. <br>
<table><tr><td colspan='2'>[[3ne2]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Archaeoglobus_fulgidus Archaeoglobus fulgidus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NE2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3NE2 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BOG:B-OCTYLGLUCOSIDE'>BOG</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3&#8491;</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2f2b|2f2b]]</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BOG:B-OCTYLGLUCOSIDE'>BOG</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">aqpM, AF_1426 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2234 ARCFL])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ne2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ne2 OCA], [https://pdbe.org/3ne2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ne2 RCSB], [https://www.ebi.ac.uk/pdbsum/3ne2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ne2 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ne2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ne2 OCA], [http://pdbe.org/3ne2 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3ne2 RCSB], [http://www.ebi.ac.uk/pdbsum/3ne2 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3ne2 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/AQPM_ARCFU AQPM_ARCFU]] Channel that permits osmotically driven movement of water in both directions (By similarity).  
[https://www.uniprot.org/uniprot/AQPM_ARCFU AQPM_ARCFU] Channel that permits osmotically driven movement of water in both directions (By similarity).
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ne/3ne2_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ne/3ne2_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Arcfl]]
[[Category: Archaeoglobus fulgidus]]
[[Category: CSMP, Center for Structures of Membrane Proteins]]
[[Category: Large Structures]]
[[Category: Finer-Moore, J S]]
[[Category: Finer-Moore JS]]
[[Category: Lee, J K]]
[[Category: Lee JK]]
[[Category: Stroud, R M]]
[[Category: Stroud RM]]
[[Category: Center for structures of membrane protein]]
[[Category: Csmp]]
[[Category: PSI, Protein structure initiative]]
[[Category: Structural genomic]]
[[Category: Transmembrane helice]]
[[Category: Transport protein]]
[[Category: Water channel]]

Latest revision as of 12:13, 6 September 2023

Archaeoglobus fulgidus aquaporinArchaeoglobus fulgidus aquaporin

Structural highlights

3ne2 is a 8 chain structure with sequence from Archaeoglobus fulgidus. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 3Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

AQPM_ARCFU Channel that permits osmotically driven movement of water in both directions (By similarity).

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3ne2, resolution 3.00Å

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Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA