1mq8: Difference between revisions

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[[Image:1mq8.jpg|left|200px]]
[[Image:1mq8.jpg|left|200px]]


{{Structure
<!--
|PDB= 1mq8 |SIZE=350|CAPTION= <scene name='initialview01'>1mq8</scene>, resolution 3.30&Aring;
The line below this paragraph, containing "STRUCTURE_1mq8", creates the "Structure Box" on the page.
|SITE=
You may change the PDB parameter (which sets the PDB file loaded into the applet)  
|LIGAND= <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
|ACTIVITY=
or leave the SCENE parameter empty for the default display.
|GENE= ICAM-1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens]), LFA-1 (AlphaLbeta2) ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])
-->
|DOMAIN=
{{STRUCTURE_1mq8|  PDB=1mq8 |  SCENE= }}  
|RELATEDENTRY=[[1mq9|1MQ9]], [[1mqa|1MQA]]
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1mq8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1mq8 OCA], [http://www.ebi.ac.uk/pdbsum/1mq8 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1mq8 RCSB]</span>
}}


'''Crystal structure of alphaL I domain in complex with ICAM-1'''
'''Crystal structure of alphaL I domain in complex with ICAM-1'''
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[[Category: Yang, Y.]]
[[Category: Yang, Y.]]
[[Category: Zhang, R.]]
[[Category: Zhang, R.]]
[[Category: ig superfamily]]
[[Category: Ig superfamily]]
[[Category: metal mediated protein interface]]
[[Category: Metal mediated protein interface]]
[[Category: rossmann fold]]
[[Category: Rossmann fold]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May  3 01:35:17 2008''
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 22:19:38 2008''

Revision as of 01:35, 3 May 2008

File:1mq8.jpg

Template:STRUCTURE 1mq8

Crystal structure of alphaL I domain in complex with ICAM-1


OverviewOverview

The structure of the I domain of integrin alpha L beta 2 bound to the Ig superfamily ligand ICAM-1 reveals the open ligand binding conformation and the first example of an integrin-IgSF interface. The I domain Mg2+ directly coordinates Glu-34 of ICAM-1, and a dramatic swing of I domain residue Glu-241 enables a critical salt bridge. Liganded and unliganded structures for both high- and intermediate-affinity mutant I domains reveal that ligand binding can induce conformational change in the alpha L I domain and that allosteric signals can convert the closed conformation to intermediate or open conformations without ligand binding. Pulling down on the C-terminal alpha 7 helix with introduced disulfide bonds ratchets the beta 6-alpha 7 loop into three different positions in the closed, intermediate, and open conformations, with a progressive increase in affinity.

About this StructureAbout this Structure

1MQ8 is a Protein complex structure of sequences from Homo sapiens. Full crystallographic information is available from OCA.

ReferenceReference

Structures of the alpha L I domain and its complex with ICAM-1 reveal a shape-shifting pathway for integrin regulation., Shimaoka M, Xiao T, Liu JH, Yang Y, Dong Y, Jun CD, McCormack A, Zhang R, Joachimiak A, Takagi J, Wang JH, Springer TA, Cell. 2003 Jan 10;112(1):99-111. PMID:12526797 Page seeded by OCA on Sat May 3 01:35:17 2008

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