4dbd: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
← Older editNewer edit →
No edit summary
No edit summary
Line 1: Line 1:


==Crystal structure of orotidine 5'-monophosphate decarboxylase from Sulfolobus solfataricus==
==Crystal structure of orotidine 5'-monophosphate decarboxylase from Sulfolobus solfataricus==
<StructureSection load='4dbd' size='340' side='right' caption='[[4dbd]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
<StructureSection load='4dbd' size='340' side='right'caption='[[4dbd]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[4dbd]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Suls9 Suls9]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DBD OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4DBD FirstGlance]. <br>
<table><tr><td colspan='2'>[[4dbd]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharolobus_solfataricus_98/2 Saccharolobus solfataricus 98/2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DBD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4DBD FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3ve7|3ve7]], [[3ve9|3ve9]], [[4dbe|4dbe]]</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4dbd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dbd OCA], [https://pdbe.org/4dbd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4dbd RCSB], [https://www.ebi.ac.uk/pdbsum/4dbd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4dbd ProSAT]</span></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">pyrF, Ssol_1680 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=555311 SULS9])</td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Orotidine-5'-phosphate_decarboxylase Orotidine-5'-phosphate decarboxylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.1.23 4.1.1.23] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4dbd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dbd OCA], [http://pdbe.org/4dbd PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4dbd RCSB], [http://www.ebi.ac.uk/pdbsum/4dbd PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4dbd ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/D0KT28_SULS9 D0KT28_SULS9]] Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP).[HAMAP-Rule:MF_01200]  
[[https://www.uniprot.org/uniprot/D0KT28_SACS9 D0KT28_SACS9]] Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP).[HAMAP-Rule:MF_01200]
 
==See Also==
*[[Uridine 5'-monophosphate synthase 3D structures|Uridine 5'-monophosphate synthase 3D structures]]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Orotidine-5'-phosphate decarboxylase]]
[[Category: Large Structures]]
[[Category: Suls9]]
[[Category: Saccharolobus solfataricus 98/2]]
[[Category: Almo, S C]]
[[Category: Almo SC]]
[[Category: Desai, B]]
[[Category: Desai B]]
[[Category: Fedorov, A A]]
[[Category: Fedorov AA]]
[[Category: Fedorov, E V]]
[[Category: Fedorov EV]]
[[Category: Gerlt, J A]]
[[Category: Gerlt JA]]
[[Category: Lyase]]
[[Category: Orotidine 5'-monophosphate]]
[[Category: Orotidine 5'-monophosphate decarboxylase]]
[[Category: Tim barrel]]

Revision as of 11:10, 21 September 2022

Crystal structure of orotidine 5'-monophosphate decarboxylase from Sulfolobus solfataricusCrystal structure of orotidine 5'-monophosphate decarboxylase from Sulfolobus solfataricus

Structural highlights

4dbd is a 1 chain structure with sequence from Saccharolobus solfataricus 98/2. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

[D0KT28_SACS9] Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP).[HAMAP-Rule:MF_01200]

See Also

4dbd, resolution 1.70Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
Retrieved from "https://proteopedia.openfox.io/wiki/index.php?title=4dbd&oldid=3633678"