1iwk: Difference between revisions

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[[Image:1iwk.jpg|left|200px]]
[[Image:1iwk.jpg|left|200px]]


{{Structure
<!--
|PDB= 1iwk |SIZE=350|CAPTION= <scene name='initialview01'>1iwk</scene>, resolution 2.00&Aring;
The line below this paragraph, containing "STRUCTURE_1iwk", creates the "Structure Box" on the page.
|SITE=
You may change the PDB parameter (which sets the PDB file loaded into the applet)
|LIGAND= <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Camphor_5-monooxygenase Camphor 5-monooxygenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.14.15.1 1.14.15.1] </span>
or leave the SCENE parameter empty for the default display.
|GENE=  
-->
|DOMAIN=
{{STRUCTURE_1iwk| PDB=1iwk  | SCENE= }}  
|RELATEDENTRY=[[1iwi|1IWI]], [[1iwj|1IWJ]]
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1iwk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1iwk OCA], [http://www.ebi.ac.uk/pdbsum/1iwk PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1iwk RCSB]</span>
}}


'''Putidaredoxin-Binding Stablilizes an Active Conformer of Cytochrome P450cam in its Reduced State; Crystal Structure of Mutant(112K) Cytochrome P450cam'''
'''Putidaredoxin-Binding Stablilizes an Active Conformer of Cytochrome P450cam in its Reduced State; Crystal Structure of Mutant(112K) Cytochrome P450cam'''
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[[Category: Shiro, Y.]]
[[Category: Shiro, Y.]]
[[Category: Tarumi, A.]]
[[Category: Tarumi, A.]]
[[Category: crystal structure]]
[[Category: Crystal structure]]
[[Category: cytochrome p450cam]]
[[Category: Cytochrome p450cam]]
[[Category: mutant 112k]]
[[Category: Mutant 112k]]
[[Category: putidaredoxin binding site]]
[[Category: Putidaredoxin binding site]]
[[Category: riken structural genomics/proteomics initiative]]
[[Category: Riken structural genomics/proteomics initiative]]
[[Category: rsgi]]
[[Category: Rsgi]]
[[Category: structural genomic]]
[[Category: Structural genomic]]
 
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 21:25:38 2008''

Revision as of 20:30, 2 May 2008

File:1iwk.jpg

Template:STRUCTURE 1iwk

Putidaredoxin-Binding Stablilizes an Active Conformer of Cytochrome P450cam in its Reduced State; Crystal Structure of Mutant(112K) Cytochrome P450cam


OverviewOverview

Ferrous-carbon monoxide bound form of cytochrome P450cam (CO-P450cam) has two infrared (IR) CO stretching bands at 1940 and 1932 cm(-1). The former band is dominant (>95% in area) for CO-P450cam free of putidaredoxin (Pdx), while the latter band is dominant (>95% in area) in the complex of CO-P450cam with reduced Pdx. The binding of Pdx to CO-P450cam thus evokes a conformational change in the heme active site. To study the mechanism involved in the conformational change, surface amino acid residues Arg79, Arg109, and Arg112 in P450cam were replaced with Lys, Gln, and Met. IR spectroscopic and kinetic analyses of the mutants revealed that an enzyme that has a larger 1932 cm(-1) band area upon Pdx-binding has a larger catalytic activity. Examination of the crystal structures of R109K and R112K suggested that the interaction between the guanidium group of Arg112 and Pdx is important for the conformational change. The mutations did not change a coupling ratio between the hydroxylation product and oxygen consumed. We interpret these findings to mean that the interaction of P450cam with Pdx through Arg112 enhances electron donation from the proximal ligand (Cys357) to the O-O bond of iron-bound O(2) and, possibly, promotes electron transfer from reduced Pdx to oxyP450cam, thereby facilitating the O-O bond splitting.

About this StructureAbout this Structure

1IWK is a Single protein structure of sequence from Pseudomonas putida. Full crystallographic information is available from OCA.

ReferenceReference

Infrared spectroscopic and mutational studies on putidaredoxin-induced conformational changes in ferrous CO-P450cam., Nagano S, Shimada H, Tarumi A, Hishiki T, Kimata-Ariga Y, Egawa T, Suematsu M, Park SY, Adachi S, Shiro Y, Ishimura Y, Biochemistry. 2003 Dec 16;42(49):14507-14. PMID:14661963 Page seeded by OCA on Fri May 2 20:30:35 2008

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