1i57: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
No edit summary
No edit summary
Line 1: Line 1:
[[Image:1i57.gif|left|200px]]
[[Image:1i57.gif|left|200px]]


{{Structure
<!--
|PDB= 1i57 |SIZE=350|CAPTION= <scene name='initialview01'>1i57</scene>, resolution 2.1&Aring;
The line below this paragraph, containing "STRUCTURE_1i57", creates the "Structure Box" on the page.
|SITE=
You may change the PDB parameter (which sets the PDB file loaded into the applet)
|LIGAND= <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Protein-tyrosine-phosphatase Protein-tyrosine-phosphatase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.3.48 3.1.3.48] </span>
or leave the SCENE parameter empty for the default display.
|GENE= PTN1_HUMAN ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])
-->
|DOMAIN=
{{STRUCTURE_1i57| PDB=1i57  | SCENE= }}  
|RELATEDENTRY=
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1i57 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1i57 OCA], [http://www.ebi.ac.uk/pdbsum/1i57 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1i57 RCSB]</span>
}}


'''CRYSTAL STRUCTURE OF APO HUMAN PTP1B (C215S) MUTANT'''
'''CRYSTAL STRUCTURE OF APO HUMAN PTP1B (C215S) MUTANT'''
Line 31: Line 28:
[[Category: Patel, V.]]
[[Category: Patel, V.]]
[[Category: Scapin, G.]]
[[Category: Scapin, G.]]
[[Category: conformational change]]
[[Category: Conformational change]]
[[Category: phosphate-binding loop]]
[[Category: Phosphate-binding loop]]
[[Category: substrate-trapping mutant]]
[[Category: Substrate-trapping mutant]]
[[Category: wpd loop]]
[[Category: Wpd loop]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Fri May  2 19:35:19 2008''
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 21:14:47 2008''

Revision as of 19:35, 2 May 2008

File:1i57.gif

Template:STRUCTURE 1i57

CRYSTAL STRUCTURE OF APO HUMAN PTP1B (C215S) MUTANT


OverviewOverview

Protein-tyrosine phosphatases catalyze the hydrolysis of phosphate monoesters via a two-step mechanism involving a covalent phospho-enzyme intermediate. Biochemical and site-directed mutagenesis experiments show that the invariant Cys residue present in the PTPase signature motif (H/V)CX(5)R(S/T) (i.e., C215 in PTP1B) is absolutely required for activity. Mutation of the invariant Cys to Ser results in a catalytically inactive enzyme, which still is capable of binding substrates and inhibitors. Although it often is assumed that substrate-trapping mutants such as the C215S retain, in solution, the structural and binding properties of wild-type PTPases, significant differences have been found in the few studies that have addressed this issue, suggesting that the mutation may lead to structural/conformational alterations in or near the PTP1B binding site. Several crystal structures of apo-WT PTP1B, and of WT- and C215S-mutant PTP1B in complex with different ligands are available, but no structure of the apo-PTP1B C215S has ever been reported. In all previously reported structures, residues of the PTPase signature motif have an identical conformation, while residues of the WPD loop (a surface loop which includes the catalytic Asp) assume a different conformation in the presence or absence of ligand. These observations led to the hypothesis that the different spectroscopic and thermodynamic properties of the mutant protein may be the result of a different conformation for the WPD loop. We report here the structure of the apo-PTP1B C215S mutant, which reveals that, while the WPD loop is in the open conformation observed in the apo WT enzyme crystal structure, the residues of the PTPases signature motif are in a dramatically different conformation. These results provide a structural basis for the differences in spectroscopic properties and thermodynamic parameters in inhibitor binding observed for the wild-type and mutant enzymes.

About this StructureAbout this Structure

1I57 is a Single protein structure of sequence from Homo sapiens. Full crystallographic information is available from OCA.

ReferenceReference

The structure of apo protein-tyrosine phosphatase 1B C215S mutant: more than just an S --> O change., Scapin G, Patel S, Patel V, Kennedy B, Asante-Appiah E, Protein Sci. 2001 Aug;10(8):1596-605. PMID:11468356 Page seeded by OCA on Fri May 2 19:35:19 2008

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA