5ji2: Difference between revisions

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'''Unreleased structure'''


The entry 5ji2 is ON HOLD  until Paper Publication
==HslU L199Q in HslUV complex==
<StructureSection load='5ji2' size='340' side='right' caption='[[5ji2]], [[Resolution|resolution]] 3.31&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[5ji2]] is a 6 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5JI2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5JI2 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1g4a|1g4a]], [[5ji3|5ji3]]</td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/HslU--HslV_peptidase HslU--HslV peptidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.25.2 3.4.25.2] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5ji2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ji2 OCA], [http://pdbe.org/5ji2 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5ji2 RCSB], [http://www.ebi.ac.uk/pdbsum/5ji2 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5ji2 ProSAT]</span></td></tr>
</table>
== Function ==
[[http://www.uniprot.org/uniprot/HSLV_ECO55 HSLV_ECO55]] Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery. [[http://www.uniprot.org/uniprot/HSLU_ECO57 HSLU_ECO57]] ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis.
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
BACKGROUND: The bacterial heat shock locus HslU ATPase and HslV peptidase together form an ATP-dependent HslVU protease. Bacterial HslVU is a homolog of the eukaryotic 26S proteasome. Crystallographic studies of HslVU should provide an understanding of ATP-dependent protein unfolding, translocation, and proteolysis by this and other ATP-dependent proteases. RESULTS: We present a 3.0 A resolution crystal structure of HslVU with an HslU hexamer bound at one end of an HslV dodecamer. The structure shows that the central pores of the ATPase and peptidase are next to each other and aligned. The central pore of HslU consists of a GYVG motif, which is conserved among protease-associated ATPases. The binding of one HslU hexamer to one end of an HslV dodecamer in the 3.0 A resolution structure opens both HslV central pores and induces asymmetric changes in HslV. CONCLUSIONS: Analysis of nucleotide binding induced conformational changes in the current and previous HslU structures suggests a protein unfolding-coupled translocation mechanism. In this mechanism, unfolded polypeptides are threaded through the aligned pores of the ATPase and peptidase and translocated into the peptidase central chamber.


Authors: Grant, R.A., Sauer, R.T., Schmitz, K.R., Baytshtok, V.
Crystal structures of the HslVU peptidase-ATPase complex reveal an ATP-dependent proteolysis mechanism.,Wang J, Song JJ, Franklin MC, Kamtekar S, Im YJ, Rho SH, Seong IS, Lee CS, Chung CH, Eom SH Structure. 2001 Feb 7;9(2):177-84. PMID:11250202<ref>PMID:11250202</ref>


Description: HslU L199Q in HslUV complex
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
[[Category: Unreleased Structures]]
</div>
[[Category: Schmitz, K.R]]
<div class="pdbe-citations 5ji2" style="background-color:#fffaf0;"></div>
[[Category: Sauer, R.T]]
== References ==
[[Category: Grant, R.A]]
<references/>
__TOC__
</StructureSection>
[[Category: HslU--HslV peptidase]]
[[Category: Baytshtok, V]]
[[Category: Baytshtok, V]]
[[Category: Grant, R A]]
[[Category: Sauer, R T]]
[[Category: Schmitz, K R]]
[[Category: Aaa+ atpase]]
[[Category: Hydrolase]]
[[Category: Peptidase]]

Revision as of 21:35, 10 December 2016

HslU L199Q in HslUV complexHslU L199Q in HslUV complex

Structural highlights

5ji2 is a 6 chain structure. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:,
Activity:HslU--HslV peptidase, with EC number 3.4.25.2
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

[HSLV_ECO55] Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery. [HSLU_ECO57] ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis.

Publication Abstract from PubMed

BACKGROUND: The bacterial heat shock locus HslU ATPase and HslV peptidase together form an ATP-dependent HslVU protease. Bacterial HslVU is a homolog of the eukaryotic 26S proteasome. Crystallographic studies of HslVU should provide an understanding of ATP-dependent protein unfolding, translocation, and proteolysis by this and other ATP-dependent proteases. RESULTS: We present a 3.0 A resolution crystal structure of HslVU with an HslU hexamer bound at one end of an HslV dodecamer. The structure shows that the central pores of the ATPase and peptidase are next to each other and aligned. The central pore of HslU consists of a GYVG motif, which is conserved among protease-associated ATPases. The binding of one HslU hexamer to one end of an HslV dodecamer in the 3.0 A resolution structure opens both HslV central pores and induces asymmetric changes in HslV. CONCLUSIONS: Analysis of nucleotide binding induced conformational changes in the current and previous HslU structures suggests a protein unfolding-coupled translocation mechanism. In this mechanism, unfolded polypeptides are threaded through the aligned pores of the ATPase and peptidase and translocated into the peptidase central chamber.

Crystal structures of the HslVU peptidase-ATPase complex reveal an ATP-dependent proteolysis mechanism.,Wang J, Song JJ, Franklin MC, Kamtekar S, Im YJ, Rho SH, Seong IS, Lee CS, Chung CH, Eom SH Structure. 2001 Feb 7;9(2):177-84. PMID:11250202[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

  1. Wang J, Song JJ, Franklin MC, Kamtekar S, Im YJ, Rho SH, Seong IS, Lee CS, Chung CH, Eom SH. Crystal structures of the HslVU peptidase-ATPase complex reveal an ATP-dependent proteolysis mechanism. Structure. 2001 Feb 7;9(2):177-84. PMID:11250202

5ji2, resolution 3.31Å

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