1fs3: Difference between revisions

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[[Image:1fs3.gif|left|200px]]
[[Image:1fs3.gif|left|200px]]


{{Structure
<!--
|PDB= 1fs3 |SIZE=350|CAPTION= <scene name='initialview01'>1fs3</scene>, resolution 1.40&Aring;
The line below this paragraph, containing "STRUCTURE_1fs3", creates the "Structure Box" on the page.
|SITE=
You may change the PDB parameter (which sets the PDB file loaded into the applet)
|LIGAND=
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Pancreatic_ribonuclease Pancreatic ribonuclease], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.27.5 3.1.27.5] </span>
or leave the SCENE parameter empty for the default display.
|GENE=  
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|DOMAIN=
{{STRUCTURE_1fs3| PDB=1fs3  | SCENE= }}  
|RELATEDENTRY=[[1dp1|1DP1]], [[1eic|1EIC]], [[1eid|1EID]], [[1eie|1EIE]]
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1fs3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1fs3 OCA], [http://www.ebi.ac.uk/pdbsum/1fs3 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1fs3 RCSB]</span>
}}


'''CRYSTAL STRUCTURE OF WILD-TYPE BOVINE PANCREATIC RIBONUCLEASE A'''
'''CRYSTAL STRUCTURE OF WILD-TYPE BOVINE PANCREATIC RIBONUCLEASE A'''
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[[Category: Moriyama, H.]]
[[Category: Moriyama, H.]]
[[Category: Ueki, T.]]
[[Category: Ueki, T.]]
[[Category: bovine pancrea]]
[[Category: Bovine pancrea]]
[[Category: hydrolase]]
[[Category: Hydrolase]]
[[Category: ribonuclease]]
[[Category: Ribonuclease]]
[[Category: rnase some]]
[[Category: Rnase some]]
 
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 20:29:09 2008''

Revision as of 16:42, 2 May 2008

File:1fs3.gif

Template:STRUCTURE 1fs3

CRYSTAL STRUCTURE OF WILD-TYPE BOVINE PANCREATIC RIBONUCLEASE A


OverviewOverview

The replacement of Phe120 with other hydrophobic residues causes a decrease in the activity and thermal stability in ribonuclease A (RNase A). To explain this, the crystal structures of wild-type RNase A and three mutants--F120A, F120G, and F120W--were analyzed up to a 1.4 A resolution. Although the overall backbone structures of all mutant samples were nearly the same as that of wild-type RNase A, except for the C-terminal region of F120G with a high B-factor, two local conformational changes were observed at His119 in the mutants. First, His119 of the wild-type and F120W RNase A adopted an A position, whereas those of F120A and F120G adopted a B position, but the static crystallographic position did not reflect either the efficiency of transphosphorylation or the hydrolysis reaction. Second, His119 imidazole rings of all mutant enzymes were deviated from that of wild-type RNase A, and those of F120W and F120G appeared to be "inside out" compared with that of wild-type RNase A. Only approximately 1 A change in the distance between N(epsilon2) of His12 and N(delta1) of His119 causes a drastic decrease in k(cat), indicating that the active site requires the strict positioning of the catalytic residues. A good correlation between the change in total accessible surface area of the pockets on the surface of the mutant enzymes and enthalpy change in their thermal denaturation also indicates that the effects caused by the replacements are not localized but extend to remote regions of the protein molecule.

About this StructureAbout this Structure

1FS3 is a Single protein structure of sequence from Bos taurus. Full crystallographic information is available from OCA.

ReferenceReference

Conformational strictness required for maximum activity and stability of bovine pancreatic ribonuclease A as revealed by crystallographic study of three Phe120 mutants at 1.4 A resolution., Chatani E, Hayashi R, Moriyama H, Ueki T, Protein Sci. 2002 Jan;11(1):72-81. PMID:11742124 Page seeded by OCA on Fri May 2 16:41:59 2008

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