3du2: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
No edit summary
No edit summary
Line 1: Line 1:
==E(L212)A mutant structure of photosynthetic reaction center from Rhodobacter sphaeroides==
==E(L212)A mutant structure of photosynthetic reaction center from Rhodobacter sphaeroides==
<StructureSection load='3du2' size='340' side='right' caption='[[3du2]], [[Resolution|resolution]] 3.10&Aring;' scene=''>
<StructureSection load='3du2' size='340' side='right' caption='[[3du2]], [[Resolution|resolution]] 3.10&Aring;' scene=''>
Line 6: Line 7:
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3dsy|3dsy]], [[3dta|3dta]], [[3dtr|3dtr]], [[3dts|3dts]], [[3du3|3du3]], [[3duq|3duq]], [[1k6l|1k6l]], [[1k6n|1k6n]]</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3dsy|3dsy]], [[3dta|3dta]], [[3dtr|3dtr]], [[3dts|3dts]], [[3du3|3du3]], [[3duq|3duq]], [[1k6l|1k6l]], [[1k6n|1k6n]]</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">pufL ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1063 "Rhodococcus capsulatus" Molisch 1907]), pufM ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1063 "Rhodococcus capsulatus" Molisch 1907]), puhA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1063 "Rhodococcus capsulatus" Molisch 1907])</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">pufL ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1063 "Rhodococcus capsulatus" Molisch 1907]), pufM ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1063 "Rhodococcus capsulatus" Molisch 1907]), puhA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1063 "Rhodococcus capsulatus" Molisch 1907])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3du2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3du2 OCA], [http://pdbe.org/3du2 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3du2 RCSB], [http://www.ebi.ac.uk/pdbsum/3du2 PDBsum]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3du2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3du2 OCA], [http://pdbe.org/3du2 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3du2 RCSB], [http://www.ebi.ac.uk/pdbsum/3du2 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3du2 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
Line 14: Line 15:
Check<jmol>
Check<jmol>
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/du/3du2_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/du/3du2_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>

Revision as of 12:16, 14 November 2018

E(L212)A mutant structure of photosynthetic reaction center from Rhodobacter sphaeroidesE(L212)A mutant structure of photosynthetic reaction center from Rhodobacter sphaeroides

Structural highlights

3du2 is a 3 chain structure with sequence from "rhodococcus_capsulatus"_molisch_1907 "rhodococcus capsulatus" molisch 1907. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:, , , , , ,
Gene:pufL ("Rhodococcus capsulatus" Molisch 1907), pufM ("Rhodococcus capsulatus" Molisch 1907), puhA ("Rhodococcus capsulatus" Molisch 1907)
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

[RCEL_RHOSH] The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. [RCEH_RHOSH] The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. [RCEM_RHOSH] The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis.

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3du2, resolution 3.10Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA