1vd1: Difference between revisions

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==Crystal structure of RNase NT in complex with 5'-AMP==
==Crystal structure of RNase NT in complex with 5'-AMP==
<StructureSection load='1vd1' size='340' side='right' caption='[[1vd1]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
<StructureSection load='1vd1' size='340' side='right' caption='[[1vd1]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1vcz|1vcz]], [[1vd3|1vd3]]</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1vcz|1vcz]], [[1vd3|1vd3]]</td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Ribonuclease_T(2) Ribonuclease T(2)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.27.1 3.1.27.1] </span></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Ribonuclease_T(2) Ribonuclease T(2)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.27.1 3.1.27.1] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1vd1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vd1 OCA], [http://pdbe.org/1vd1 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1vd1 RCSB], [http://www.ebi.ac.uk/pdbsum/1vd1 PDBsum]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1vd1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vd1 OCA], [http://pdbe.org/1vd1 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1vd1 RCSB], [http://www.ebi.ac.uk/pdbsum/1vd1 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1vd1 ProSAT]</span></td></tr>
</table>
</table>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
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Check<jmol>
Check<jmol>
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vd/1vd1_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vd/1vd1_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>

Revision as of 10:41, 4 April 2018

Crystal structure of RNase NT in complex with 5'-AMPCrystal structure of RNase NT in complex with 5'-AMP

Structural highlights

1vd1 is a 1 chain structure with sequence from Nicgu. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:
Activity:Ribonuclease T(2), with EC number 3.1.27.1
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

1vd1, resolution 1.80Å

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