3h6e: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
No edit summary
No edit summary
Line 1: Line 1:
==The crystal structure of a carbohydrate kinase from Novosphingobium aromaticivorans==
==The crystal structure of a carbohydrate kinase from Novosphingobium aromaticivorans==
<StructureSection load='3h6e' size='340' side='right' caption='[[3h6e]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
<StructureSection load='3h6e' size='340' side='right' caption='[[3h6e]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
Line 5: Line 6:
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Saro_1051 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=279238 NOVAD])</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Saro_1051 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=279238 NOVAD])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3h6e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3h6e OCA], [http://pdbe.org/3h6e PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3h6e RCSB], [http://www.ebi.ac.uk/pdbsum/3h6e PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/3h6e TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3h6e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3h6e OCA], [http://pdbe.org/3h6e PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3h6e RCSB], [http://www.ebi.ac.uk/pdbsum/3h6e PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3h6e ProSAT], [http://www.topsan.org/Proteins/NYSGXRC/3h6e TOPSAN]</span></td></tr>
</table>
</table>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
Line 11: Line 12:
Check<jmol>
Check<jmol>
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/h6/3h6e_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/h6/3h6e_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>

Revision as of 09:06, 7 December 2018

The crystal structure of a carbohydrate kinase from Novosphingobium aromaticivoransThe crystal structure of a carbohydrate kinase from Novosphingobium aromaticivorans

Structural highlights

3h6e is a 2 chain structure with sequence from Novad. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
NonStd Res:
Gene:Saro_1051 (NOVAD)
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3h6e, resolution 2.50Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA