2pd0: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
No edit summary
No edit summary
Line 1: Line 1:
==Protein cgd2_2020 from Cryptosporidium parvum==
==Protein cgd2_2020 from Cryptosporidium parvum==
<StructureSection load='2pd0' size='340' side='right' caption='[[2pd0]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
<StructureSection load='2pd0' size='340' side='right' caption='[[2pd0]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
Line 6: Line 7:
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">XP_626409 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=5807 CRYPV])</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">XP_626409 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=5807 CRYPV])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2pd0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pd0 OCA], [http://pdbe.org/2pd0 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2pd0 RCSB], [http://www.ebi.ac.uk/pdbsum/2pd0 PDBsum]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2pd0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pd0 OCA], [http://pdbe.org/2pd0 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2pd0 RCSB], [http://www.ebi.ac.uk/pdbsum/2pd0 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2pd0 ProSAT]</span></td></tr>
</table>
</table>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
Line 12: Line 13:
Check<jmol>
Check<jmol>
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pd/2pd0_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pd/2pd0_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>

Revision as of 11:33, 29 August 2018

Protein cgd2_2020 from Cryptosporidium parvumProtein cgd2_2020 from Cryptosporidium parvum

Structural highlights

2pd0 is a 4 chain structure with sequence from Crypv. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:
NonStd Res:
Gene:XP_626409 (CRYPV)
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2pd0, resolution 2.30Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA