2cz5: Difference between revisions
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==Crystal structure of orotidine 5'-phosphate decarboxylase from Pyrococcus horikoshii OT3== | ==Crystal structure of orotidine 5'-phosphate decarboxylase from Pyrococcus horikoshii OT3== | ||
<StructureSection load='2cz5' size='340' side='right' caption='[[2cz5]], [[Resolution|resolution]] 1.85Å' scene=''> | <StructureSection load='2cz5' size='340' side='right' caption='[[2cz5]], [[Resolution|resolution]] 1.85Å' scene=''> | ||
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">pyrF, PH0731 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=53953 'Pyrococcus shinkaii'])</td></tr> | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">pyrF, PH0731 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=53953 'Pyrococcus shinkaii'])</td></tr> | ||
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Orotidine-5'-phosphate_decarboxylase Orotidine-5'-phosphate decarboxylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.1.23 4.1.1.23] </span></td></tr> | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Orotidine-5'-phosphate_decarboxylase Orotidine-5'-phosphate decarboxylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.1.23 4.1.1.23] </span></td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2cz5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cz5 OCA], [http://pdbe.org/2cz5 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2cz5 RCSB], [http://www.ebi.ac.uk/pdbsum/2cz5 PDBsum], [http://www.topsan.org/Proteins/RSGI/2cz5 TOPSAN]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2cz5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cz5 OCA], [http://pdbe.org/2cz5 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2cz5 RCSB], [http://www.ebi.ac.uk/pdbsum/2cz5 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2cz5 ProSAT], [http://www.topsan.org/Proteins/RSGI/2cz5 TOPSAN]</span></td></tr> | ||
</table> | </table> | ||
== Function == | == Function == | ||
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Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cz/2cz5_consurf.spt"</scriptWhenChecked> | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cz/2cz5_consurf.spt"</scriptWhenChecked> | ||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
Revision as of 09:20, 30 May 2018
Crystal structure of orotidine 5'-phosphate decarboxylase from Pyrococcus horikoshii OT3Crystal structure of orotidine 5'-phosphate decarboxylase from Pyrococcus horikoshii OT3
Structural highlights
Function[PYRF_PYRHO] Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP) (By similarity).[HAMAP-Rule:MF_01200_A] Evolutionary Conservation Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf. |
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