1cmj: Difference between revisions

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[[Image:1cmj.gif|left|200px]]
[[Image:1cmj.gif|left|200px]]


{{Structure
<!--
|PDB= 1cmj |SIZE=350|CAPTION= <scene name='initialview01'>1cmj</scene>, resolution 1.70&Aring;
The line below this paragraph, containing "STRUCTURE_1cmj", creates the "Structure Box" on the page.
|SITE=
You may change the PDB parameter (which sets the PDB file loaded into the applet)
|LIGAND= <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=NO:NITROGEN+OXIDE'>NO</scene>
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
|ACTIVITY=
or leave the SCENE parameter empty for the default display.
|GENE=
-->
|DOMAIN=
{{STRUCTURE_1cmj| PDB=1cmj  | SCENE= }}  
|RELATEDENTRY=[[1cl6|1CL6]], [[1cmn|1CMN]]
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1cmj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1cmj OCA], [http://www.ebi.ac.uk/pdbsum/1cmj PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1cmj RCSB]</span>
}}


'''CRYSTAL STRUCTURES OF FERRIC-NO COMPLEXES OF FUNGAL NITRIC OXIDE REDUCTASE AND THEIR SER286 MUTANTS AT CRYOGENIC TEMPERATURE'''
'''CRYSTAL STRUCTURES OF FERRIC-NO COMPLEXES OF FUNGAL NITRIC OXIDE REDUCTASE AND THEIR SER286 MUTANTS AT CRYOGENIC TEMPERATURE'''
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[[Category: Park, S Y.]]
[[Category: Park, S Y.]]
[[Category: Shiro, Y.]]
[[Category: Shiro, Y.]]
[[Category: cytochrome p450nor]]
[[Category: Cytochrome p450nor]]
[[Category: mutagenesis(s286t)]]
[[Category: Nitric oxide reductase]]
[[Category: nitric oxide reductase]]
[[Category: No-liganded]]
[[Category: no-liganded]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Fri May  2 12:53:35 2008''
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 19:24:29 2008''

Revision as of 12:53, 2 May 2008

File:1cmj.gif

Template:STRUCTURE 1cmj

CRYSTAL STRUCTURES OF FERRIC-NO COMPLEXES OF FUNGAL NITRIC OXIDE REDUCTASE AND THEIR SER286 MUTANTS AT CRYOGENIC TEMPERATURE


OverviewOverview

Fungal nitric-oxide reductase (NOR) is a heme enzyme that catalyzes the reduction of NO to N(2)O through its ferric-NO complex, the first intermediate of the catalysis. Crystal structures of the ferric-NO forms of wild type (WT) fungal NOR, and of the Ser(286) --> Val and Ser(286) --> Thr mutant enzymes were determined to 1.7-A resolution at cryogenic temperature (100 K). This shows a slightly tilted and bent NO binding to the heme iron, in sharp contrast to the highly bent NO coordination found in ferrous hemoproteins. In the WT structure, a specific hydrogen-bonding network that connects the active site to the solvent was identified, H(2)O(Wat(74))-Ser(286)-H(2)O(Wat(33))-Asp(393)-solvent. Wat(74) is located 3.10 A from the iron-bound NO. Replacement of Ser(286) with Val or Thr scarcely alters the NO coordination structure but expels the water molecules, Wat(74) from the active site. The Asp(393) mutation does not influence the position of Wat(74), but disrupts the hydrogen-bonding network at Wat(33), as evidenced by enzymatic, kinetic, and spectroscopic (resonance Raman and IR) results. The structural changes observed upon the Ser(286) or the Asp(393) mutation are consistent with the dramatic loss of the enzymatic activity for the NO reduction of fungal NOR. We have conclusively identified the water molecule, Wat(74), adjacent to the iron-bound NO as a proton donor to the Fe-NO moiety. In addition, we find the hydrogen-bonding network, H(2)O(Wat(74))-Ser(286)-H(2)O(Wat(33))-Asp(393), as a proton delivery pathway in the NO reduction reaction by fungal NOR.

About this StructureAbout this Structure

1CMJ is a Single protein structure of sequence from Fusarium oxysporum. Full crystallographic information is available from OCA.

ReferenceReference

Proton delivery in NO reduction by fungal nitric-oxide reductase. Cryogenic crystallography, spectroscopy, and kinetics of ferric-NO complexes of wild-type and mutant enzymes., Shimizu H, Obayashi E, Gomi Y, Arakawa H, Park SY, Nakamura H, Adachi S, Shoun H, Shiro Y, J Biol Chem. 2000 Feb 18;275(7):4816-26. PMID:10671516 Page seeded by OCA on Fri May 2 12:53:35 2008

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